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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4338298   uncharacterized LOC4338298 
 osa-r.6   4338298   uncharacterized LOC4338298 
 osa-m.8   4338298   uncharacterized LOC4338298 
 osa-e.1   4338298   uncharacterized LOC4338298 
 zma-u.5   103643760   crooked neck-like protein 1 
 ath-u.5   AT5G41770   crooked neck protein, putative / cell cycle protein 
 gma-u.5   100811745   crooked neck-like protein 1 
 gma-u.5   100791616   crooked neck-like protein 1 
 sly-u.5   101245441   uncharacterized LOC101245441 
 sly-u.5   101257538   uncharacterized LOC101257538 
 vvi-u.5   100255371   crooked neck-like protein 1 
 ppo-u.5   7479272   uncharacterized LOC7479272 
 ppo-u.5   7458229   uncharacterized LOC7458229 
 mtr-u.5   11439028   crooked neck-like protein 1 
 mtr-u.5   11426099   crooked neck-like protein 1 

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Top 50 coexpressed genes to 4338298 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4338298 (osa-u.5 coexpression data)

CoexMap"4338298"


osaLOC4338298 | Entrez gene ID : 4338298      
Species osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 1 2 2 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa03040 [list] [network] Spliceosome (204 genes)
GO BP
GO:0000245 [list] [network] spliceosomal complex assembly  (16 genes)  IEA  
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (162 genes)  IEA  
GO CC
GO:0071007 [list] [network] U2-type catalytic step 2 spliceosome  (6 genes)  IEA  
GO:0000974 [list] [network] Prp19 complex  (13 genes)  IEA  
GO:0071014 [list] [network] post-mRNA release spliceosomal complex  (18 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (37 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015640151.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 1,  chlo 1,  golg 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_015640151.1)
Subcellular
localization
TargetP
other 6,  chlo 6  (predict for XP_015640151.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4338298
osa-r.6
for
4338298
osa-m.8
for
4338298
osa-e.1
for
4338298
zma-u.5
for
103643760
ath-u.5
for
AT5G41770
gma-u.5
for
100811745
gma-u.5
for
100791616
sly-u.5
for
101245441
sly-u.5
for
101257538
vvi-u.5
for
100255371
ppo-u.5
for
7479272
ppo-u.5
for
7458229
mtr-u.5
for
11439028
mtr-u.5
for
11426099


Ortholog ID: 5736
Species osa tae tae hvu bdi zma sbi sbi gma gma sly sly bra bra vvi ppo ppo mtr mtr ghi ghi bna bna sot sot cit nta nta cre
Symbol LOC4338298 LOC123155830 LOC123163807 LOC123413606 LOC100829074 LOC103643760 LOC8054178 LOC8076963 LOC100791616 LOC100811745 LOC101245441 LOC101257538 LOC103864120 LOC103850228 LOC100255371 LOC7458229 LOC7479272 LOC11426099 LOC11439028 LOC107924173 LOC107904473 LOC125576576 LOC106406050 LOC102604573 LOC102594042 LOC102620269 LOC107781942 LOC107790486 CHLRE_14g621000v5
Function* uncharacterized LOC4338298 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 uncharacterized LOC101245441 uncharacterized LOC101257538 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 uncharacterized LOC7458229 uncharacterized LOC7479272 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 crooked neck-like protein 1 uncharacterized LOC102620269 uncharacterized LOC107781942 uncharacterized LOC107790486 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
bdi04120 Ubiquitin mediated proteolysis 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03082 ATP-dependent chromatin remodeling 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 10
gma03015 mRNA surveillance pathway 5
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma00970 Aminoacyl-tRNA biosynthesis 4
gma03015 mRNA surveillance pathway 3
gma03022 Basal transcription factors 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 4
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 3
nta03040 Spliceosome 2
nta03420 Nucleotide excision repair 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4338298 123155830 123163807 123413606 100829074 103643760 8054178 8076963 100791616 100811745 101245441 101257538 103864120 103850228 100255371 7458229 7479272 11426099 11439028 107924173 107904473 125576576 106406050 102604573 102594042 102620269 107781942 107790486 5715897
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