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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102594530   zinc finger CCCH domain-containing protein 1 
 sly-u.5   101246886   zinc finger CCCH domain-containing protein 1 
 ath-u.5   AT5G06420   Zinc finger (CCCH-type/C3HC4-type RING finger) family protein 
 ath-u.5   AT1G01350   Zinc finger (CCCH-type/C3HC4-type RING finger) family protein 
 gma-u.5   100817146   zinc finger CCCH domain-containing protein 1 
 gma-u.5   100787434   zinc finger CCCH domain-containing protein 1 
 vvi-u.5   100251778   zinc finger CCCH domain-containing protein 1 
 ppo-u.5   112324158   zinc finger CCCH domain-containing protein 1 
 mtr-u.5   11434789   zinc finger CCCH domain-containing protein 1 
 osa-u.5   4329092   zinc finger CCCH domain-containing protein 15-like 
 zma-u.5   100279943   putative RING zinc finger domain superfamily protein 

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Top 50 coexpressed genes to 102594530 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102594530 (sot-r.1 coexpression data)

CoexMap"102594530"


sotLOC102594530 | Entrez gene ID : 102594530      
Species sot sly ath gma vvi ppo mtr osa zma sbi nta bra cre hvu cit bdi tae bna ghi
Paralog 1 1 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034247 [list] [network] snoRNA splicing  (1 genes)  IEA  
GO CC
GO:0005684 [list] [network] U2-type spliceosomal complex  (37 genes)  IEA  
GO MF
GO:0046872 [list] [network] metal ion binding  (2103 genes)  IEA  
Protein XP_006364817.1 [sequence] [blastp]
XP_015159622.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  mito 1  (predict for XP_006364817.1)
nucl 9,  cyto 1,  mito 1  (predict for XP_015159622.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_006364817.1)
other 7,  chlo 4  (predict for XP_015159622.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102594530

.
sly-u.5
for
101246886

.
ath-u.5
for
AT5G06420

.
ath-u.5
for
AT1G01350

.
gma-u.5
for
100817146

.
gma-u.5
for
100787434

.
vvi-u.5
for
100251778

.
ppo-u.5
for
112324158

.
mtr-u.5
for
11434789

.
osa-u.5
for
4329092

.
zma-u.5
for
100279943

.


Ortholog ID: 9639
Species ath ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G01350 AT5G06420 LOC100787434 LOC100817146 LOC101246886 LOC4329092 LOC100279943 LOC103844643 LOC100251778 LOC112324158 LOC11434789 LOC123137882 LOC123098032 LOC123449135 LOC107910592 LOC107893706 LOC106370879 LOC106402180 CHLRE_06g254650v5 LOC8078345 LOC102594530 LOC102614339 LOC100840636 LOC107829014 LOC107820773
Function* Zinc finger (CCCH-type/C3HC4-type RING finger) family protein Zinc finger (CCCH-type/C3HC4-type RING finger) family protein zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 15-like putative RING zinc finger domain superfamily protein zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 15 zinc finger CCCH domain-containing protein 15 zinc finger CCCH domain-containing protein 15 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 uncharacterized protein zinc finger CCCH domain-containing protein 15 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 15 zinc finger CCCH domain-containing protein 1-like zinc finger CCCH domain-containing protein 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra04141 Protein processing in endoplasmic reticulum 3
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 3
cre00260 Glycine, serine and threonine metabolism 3
cre01230 Biosynthesis of amino acids 3
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838964 830530 100787434 100817146 101246886 4329092 100279943 103844643 100251778 112324158 11434789 123137882 123098032 123449135 107910592 107893706 106370879 106402180 5722140 8078345 102594530 102614339 100840636 107829014 107820773
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