ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4329092	zinc finger CCCH domain-containing protein 15-like
osa-r.6	4329092	zinc finger CCCH domain-containing protein 15-like
osa-m.8	4329092	zinc finger CCCH domain-containing protein 15-like
osa-e.1	4329092	zinc finger CCCH domain-containing protein 15-like
zma-u.5	100279943	putative RING zinc finger domain superfamily protein
ath-u.5	AT5G06420	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein
ath-u.5	AT1G01350	Zinc finger (CCCH-type/C3HC4-type RING finger) family protein
gma-u.5	100817146	zinc finger CCCH domain-containing protein 1
gma-u.5	100787434	zinc finger CCCH domain-containing protein 1
sly-u.5	101246886	zinc finger CCCH domain-containing protein 1
vvi-u.5	100251778	zinc finger CCCH domain-containing protein 1
ppo-u.5	112324158	zinc finger CCCH domain-containing protein 1
mtr-u.5	11434789	zinc finger CCCH domain-containing protein 1

Annotation

functional annotation

KEGG

GO BP

GO:0034247 [list] [network] snoRNA splicing

(1 genes)

IEA

GO CC

GO:0005684 [list] [network] U2-type spliceosomal complex

(49 genes)

IEA

GO MF

GO:0046872 [list] [network] metal ion binding

(2132 genes)

IEA

Protein

NP_001403449.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for NP_001403449.1)

Subcellular
localization
TargetP

other 8

(predict for NP_001403449.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4329092	osa-r.6 for 4329092	osa-m.8 for 4329092	osa-e.1 for 4329092	zma-u.5 for 100279943	ath-u.5 for AT5G06420	ath-u.5 for AT1G01350	gma-u.5 for 100817146	gma-u.5 for 100787434	sly-u.5 for 101246886	vvi-u.5 for 100251778	ppo-u.5 for 112324158	mtr-u.5 for 11434789

Ortholog

Ortholog ID: 9639

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

zinc finger CCCH domain-containing protein 15-like

zinc finger CCCH domain-containing protein 15

putative RING zinc finger domain superfamily protein

zinc finger CCCH domain-containing protein 15

Zinc finger (CCCH-type/C3HC4-type RING finger) family protein

zinc finger CCCH domain-containing protein 1

zinc finger CCCH domain-containing protein 1-like

zinc finger CCCH domain-containing protein 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5
ath03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	2
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	4
bra04141	Protein processing in endoplasmic reticulum	3
bra03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3
mtr03013	Nucleocytoplasmic transport	2
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00970	Aminoacyl-tRNA biosynthesis	3
cre00260	Glycine, serine and threonine metabolism	3
cre01230	Biosynthesis of amino acids	3
cre00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

4329092

123137882

123098032

123449135

100840636

100279943

8078345

838964

830530

100787434

100817146

101246886

103844643

100251778

112324158

11434789

107910592

107893706

106370879

106402180

102594530

102614339

107829014

107820773

5722140

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4329092 (osa-u.5 coexpression data)

Top 50 enrichment test to 4329092 (osa-u.5 coexpression data)


Species	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	4	1	2	2	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4329092 (osa-u.5 coexpression data)

Top 50 enrichment test to 4329092 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**