Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11434789   zinc finger CCCH domain-containing protein 1 
 mtr-r.5   11434789   zinc finger CCCH domain-containing protein 1 
 mtr-m.5   11434789   zinc finger CCCH domain-containing protein 1 
 gma-u.5   100817146   zinc finger CCCH domain-containing protein 1 
 gma-u.5   100787434   zinc finger CCCH domain-containing protein 1 
 ppo-u.5   112324158   zinc finger CCCH domain-containing protein 1 
 ath-u.5   AT5G06420   Zinc finger (CCCH-type/C3HC4-type RING finger) family protein 
 ath-u.5   AT1G01350   Zinc finger (CCCH-type/C3HC4-type RING finger) family protein 
 bra-r.6   103844643   zinc finger CCCH domain-containing protein 1 
 vvi-u.5   100251778   zinc finger CCCH domain-containing protein 1 
 ghi-r.1   107910592   zinc finger CCCH domain-containing protein 1 
 ghi-r.1   107893706   zinc finger CCCH domain-containing protein 1 
 bna-r.1   106402180   zinc finger CCCH domain-containing protein 1 
 bna-r.1   106370879   zinc finger CCCH domain-containing protein 1 
 cit-r.1   102614339   zinc finger CCCH domain-containing protein 1 
 sly-u.5   101246886   zinc finger CCCH domain-containing protein 1 
 sot-r.1   102594530   zinc finger CCCH domain-containing protein 1 
 nta-r.1   107820773   zinc finger CCCH domain-containing protein 1 
 nta-r.1   107829014   zinc finger CCCH domain-containing protein 1-like 
 osa-u.5   4329092   zinc finger CCCH domain-containing protein 15-like 
 zma-u.5   100279943   putative RING zinc finger domain superfamily protein 
 tae-r.2   123098032   zinc finger CCCH domain-containing protein 15 
 tae-r.2   123085307   zinc finger CCCH domain-containing protein 15 
 tae-r.2   123137882   zinc finger CCCH domain-containing protein 15 
 hvu-r.1   123449135   zinc finger CCCH domain-containing protein 15 
 sbi-r.1   8078345   zinc finger CCCH domain-containing protein 15 
 bdi-r.1   100840636   zinc finger CCCH domain-containing protein 15 
 cre-r.1   CHLRE_06g254650v5   uncharacterized protein 

close


Top 50 coexpressed genes to 11434789 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 11434789 (mtr-u.5 coexpression data)

CoexMap"11434789"


mtrLOC11434789 | Entrez gene ID : 11434789      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 2 1 1 2 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034247 [list] [network] snoRNA splicing  (1 genes)  IEA  
GO CC
GO:0005684 [list] [network] U2-type spliceosomal complex  (40 genes)  IEA  
GO MF
GO:0046872 [list] [network] metal ion binding  (2334 genes)  IEA  
Protein XP_003625944.1 [sequence] [blastp]
XP_013450398.1 [sequence] [blastp]
XP_024626416.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 3,  mito 2,  cyto 1,  vacu 1,  mito_plas 1  (predict for XP_003625944.1)
nucl 10  (predict for XP_013450398.1)
nucl 10  (predict for XP_024626416.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_003625944.1)
other 8  (predict for XP_013450398.1)
other 8  (predict for XP_024626416.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11434789
mtr-r.5
for
11434789
mtr-m.5
for
11434789
gma-u.5
for
100817146
gma-u.5
for
100787434
ppo-u.5
for
112324158
ath-u.5
for
AT5G06420
ath-u.5
for
AT1G01350
bra-r.6
for
103844643
vvi-u.5
for
100251778
ghi-r.1
for
107910592
ghi-r.1
for
107893706
bna-r.1
for
106402180
bna-r.1
for
106370879
cit-r.1
for
102614339
sly-u.5
for
101246886
sot-r.1
for
102594530
nta-r.1
for
107820773
nta-r.1
for
107829014
osa-u.5
for
4329092
zma-u.5
for
100279943
tae-r.2
for
123098032
tae-r.2
for
123085307
tae-r.2
for
123137882
hvu-r.1
for
123449135
sbi-r.1
for
8078345
bdi-r.1
for
100840636
cre-r.1
for
CHLRE_06g254650v5


Ortholog ID: 9639
Species mtr gma gma ppo ath ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC11434789 LOC100817146 LOC100787434 LOC112324158 AT5G06420 AT1G01350 LOC103844643 LOC100251778 LOC107910592 LOC107893706 LOC106402180 LOC106370879 LOC102614339 LOC101246886 LOC102594530 LOC107820773 LOC107829014 LOC4329092 LOC100279943 LOC123098032 LOC123085307 LOC123137882 LOC123449135 LOC8078345 LOC100840636 CHLRE_06g254650v5
Function* zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein Zinc finger (CCCH-type/C3HC4-type RING finger) family protein zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1 zinc finger CCCH domain-containing protein 1-like zinc finger CCCH domain-containing protein 15-like putative RING zinc finger domain superfamily protein zinc finger CCCH domain-containing protein 15 zinc finger CCCH domain-containing protein 15 zinc finger CCCH domain-containing protein 15 zinc finger CCCH domain-containing protein 15 zinc finger CCCH domain-containing protein 15 zinc finger CCCH domain-containing protein 15 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03013 Nucleocytoplasmic transport 2
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 4
bra04141 Protein processing in endoplasmic reticulum 3
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 3
cre00260 Glycine, serine and threonine metabolism 3
cre01230 Biosynthesis of amino acids 3
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11434789 100817146 100787434 112324158 830530 838964 103844643 100251778 107910592 107893706 106402180 106370879 102614339 101246886 102594530 107820773 107829014 4329092 100279943 123098032 123085307 123137882 123449135 8078345 100840636 5722140
The preparation time of this page was 0.1 [sec].