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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102596009   cell differentiation protein RCD1 homolog 
 sly-u.5   101263473   uncharacterized LOC101263473 
 sly-u.5   101260874   uncharacterized LOC101260874 
 sly-u.5   101265516   uncharacterized LOC101265516 
 ath-u.5   AT3G20800   Cell differentiation, Rcd1-like protein 
 ath-u.5   AT5G12980   Cell differentiation, Rcd1-like protein 
 gma-u.5   100801266   CCR4-NOT transcription complex subunit 9 
 gma-u.5   100792784   CCR4-NOT transcription complex subunit 9 
 vvi-u.5   100265941   uncharacterized LOC100265941 
 ppo-u.5   7483613   uncharacterized LOC7483613 
 ppo-u.5   7470819   uncharacterized LOC7470819 
 mtr-u.5   25488987   CCR4-NOT transcription complex subunit 9 
 osa-u.5   9272009   uncharacterized LOC9272009 
 zma-u.5   100193338   uncharacterized LOC100193338 

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Top 50 coexpressed genes to 102596009 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102596009 (sot-r.1 coexpression data)

CoexMap"102596009"


sotLOC102596009 | Entrez gene ID : 102596009    
Species sot sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre
Paralog 1 3 2 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot03018 [list] [network] RNA degradation (117 genes)
GO BP
GO:0006402 [list] [network] mRNA catabolic process  (82 genes)  IEA  
GO CC
GO:0030014 [list] [network] CCR4-NOT complex  (35 genes)  IEA  
GO MF
Protein XP_006352520.1 [sequence] [blastp]
XP_015166450.1 [sequence] [blastp]
XP_015166451.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  plas 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_006352520.1)
chlo 7,  nucl 1,  plas 1,  extr 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_015166450.1)
chlo 4,  cyto 3,  nucl 1,  cysk 1,  cysk_nucl 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_015166451.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_006352520.1)
chlo 7  (predict for XP_015166450.1)
other 5,  chlo 5  (predict for XP_015166451.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102596009
sly-u.5
for
101263473
sly-u.5
for
101260874
sly-u.5
for
101265516
ath-u.5
for
AT3G20800
ath-u.5
for
AT5G12980
gma-u.5
for
100801266
gma-u.5
for
100792784
vvi-u.5
for
100265941
ppo-u.5
for
7483613
ppo-u.5
for
7470819
mtr-u.5
for
25488987
osa-u.5
for
9272009
zma-u.5
for
100193338


Ortholog ID: 3107
Species sot sot sly sly nta nta ath ath gma bra bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu hvu sbi bdi bdi cre cre
Symbol LOC102595126 LOC102586245 LOC101260874 LOC101265516 LOC107787317 LOC107769964 AT3G20800 AT5G12980 LOC100784529 LOC103835726 LOC103869276 LOC100265941 LOC7483613 LOC25488987 LOC107889925 LOC121225310 LOC106401806 LOC125603095 LOC102618037 LOC9272009 LOC100193338 LOC123105303 LOC123046458 LOC123427622 LOC123431497 LOC8072335 LOC100837139 LOC100841771 CHLRE_12g540350v5 CHLRE_12g540400v5
Function* cell differentiation protein RCD1 homolog cell differentiation protein RCD1 homolog uncharacterized LOC101260874 uncharacterized LOC101265516 uncharacterized LOC107787317 uncharacterized LOC107769964 Cell differentiation, Rcd1-like protein Cell differentiation, Rcd1-like protein CCR4-NOT transcription complex subunit 9 CCR4-NOT transcription complex subunit 9 CCR4-NOT transcription complex subunit 9 uncharacterized LOC100265941 uncharacterized LOC7483613 CCR4-NOT transcription complex subunit 9 CCR4-NOT transcription complex subunit 9 CCR4-NOT transcription complex subunit 9 CCR4-NOT transcription complex subunit 9 CCR4-NOT transcription complex subunit 9-like uncharacterized LOC102618037 uncharacterized LOC9272009 uncharacterized LOC100193338 CCR4-NOT transcription complex subunit 9 CCR4-NOT transcription complex subunit 9 CCR4-NOT transcription complex subunit 9-like CCR4-NOT transcription complex subunit 9-like CCR4-NOT transcription complex subunit 9 cell differentiation protein rcd1 CCR4-NOT transcription complex subunit 9 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 3
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly04141 Protein processing in endoplasmic reticulum 3
sly04130 SNARE interactions in vesicular transport 2
sly03083 Polycomb repressive complex 2
sly00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta04122 Sulfur relay system 2
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 4
nta00730 Thiamine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03018 RNA degradation 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath03050 Proteasome 3
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 4
ath00053 Ascorbate and aldarate metabolism 2
ath00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 7
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
bra04626 Plant-pathogen interaction 2
bra00190 Oxidative phosphorylation 2
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 9
mtr00710 Carbon fixation by Calvin cycle 4
mtr01200 Carbon metabolism 4
mtr00010 Glycolysis / Gluconeogenesis 3
mtr01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 8
osa03040 Spliceosome 2
osa04120 Ubiquitin mediated proteolysis 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03015 mRNA surveillance pathway 2
zma04136 Autophagy - other 2
zma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04136 Autophagy - other 3
tae04382 Cornified envelope formation 3
tae00310 Lysine degradation 3
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 7
bdi03060 Protein export 4
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
cre03013 Nucleocytoplasmic transport 2
cre03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102595126 102586245 101260874 101265516 107787317 107769964 821628 831138 100784529 103835726 103869276 100265941 7483613 25488987 107889925 121225310 106401806 125603095 102618037 9272009 100193338 123105303 123046458 123427622 123431497 8072335 100837139 100841771 5719484 5719485
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