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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102600688   vam6/Vps39-like protein 
 sly-u.5   101266347   vacuolar sorting protein 39-like 
 sly-u.5   101260684   vacuolar sorting protein 39 
 ath-u.5   EMB2754   Vacuolar sorting protein 39 
 gma-u.5   100805342   vacuolar sorting protein 39 
 gma-u.5   100775609   vacuolar sorting protein 39 
 vvi-u.5   100265014   vacuolar sorting protein 39 
 ppo-u.5   18099277   vacuolar sorting protein 39 
 ppo-u.5   7473176   vacuolar sorting protein 39 
 mtr-u.5   11430244   vacuolar sorting protein 39 
 osa-u.5   4333909   vacuolar sorting protein 39 
 zma-u.5   100275187   vam6/Vps39-like protein 

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Top 50 coexpressed genes to 102600688 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102600688 (sot-r.1 coexpression data)

CoexMap"102600688"


sotLOC102600688 | Entrez gene ID : 102600688    
Species sot sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi nta tae cre
Paralog 1 2 1 2 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sot04148 [list] [network] Efferocytosis (56 genes)
GO BP
GO:0034058 [list] [network] endosomal vesicle fusion  (6 genes)  IEA  
GO:0006914 [list] [network] autophagy  (49 genes)  IEA  
GO:0006886 [list] [network] intracellular protein transport  (245 genes)  IEA  
GO:0016192 [list] [network] vesicle-mediated transport  (373 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (3081 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4349 genes)  IEA  
GO MF
Protein XP_006348372.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  chlo 1,  nucl_plas 1  (predict for XP_006348372.1)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for XP_006348372.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102600688
sly-u.5
for
101266347
sly-u.5
for
101260684
ath-u.5
for
EMB2754
gma-u.5
for
100805342
gma-u.5
for
100775609
vvi-u.5
for
100265014
ppo-u.5
for
18099277
ppo-u.5
for
7473176
mtr-u.5
for
11430244
osa-u.5
for
4333909
zma-u.5
for
100275187


Ortholog ID: 6635
Species sot sot sly sly nta nta ath gma gma bra bra vvi ppo ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi cre
Symbol LOC102580804 LOC102600688 LOC101260684 LOC101266347 LOC107769880 LOC107777091 EMB2754 LOC100775609 LOC100805342 LOC103835541 LOC103862479 LOC100265014 LOC7473176 LOC18099277 LOC11430244 LOC107913068 LOC121209709 LOC106411049 LOC106389810 LOC102626538 LOC4333909 LOC100275187 LOC123095899 LOC123090874 LOC123447516 LOC8062271 LOC100840876 CHLRE_06g278124v5
Function* vam6/Vps39-like protein vam6/Vps39-like protein vacuolar sorting protein 39 vacuolar sorting protein 39-like vacuolar sorting protein 39 vacuolar sorting protein 39 Vacuolar sorting protein 39 vacuolar sorting protein 39 vacuolar sorting protein 39 vacuolar sorting protein 39 vacuolar sorting protein 39 vacuolar sorting protein 39 vacuolar sorting protein 39 vacuolar sorting protein 39 vacuolar sorting protein 39 vacuolar sorting protein 39 vacuolar sorting protein 39 vacuolar sorting protein 39 vacuolar sorting protein 39-like vacuolar sorting protein 39 vacuolar sorting protein 39 vam6/Vps39-like protein vacuolar sorting protein 39 vacuolar sorting protein 39 vacuolar sorting protein 39 vam6/Vps39-like protein vam6/Vps39-like protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04148 Efferocytosis 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 4
ath04148 Efferocytosis 4
ath04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04148 Efferocytosis 4
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
vvi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 3
ppo04142 Lysosome 2
ppo04144 Endocytosis 2
ppo05100 Bacterial invasion of epithelial cells 2
ppo00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04148 Efferocytosis 2
mtr00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 4
cit04144 Endocytosis 2
cit00510 N-Glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 7
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 9
tae00730 Thiamine metabolism 2
tae01240 Biosynthesis of cofactors 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102580804 102600688 101260684 101266347 107769880 107777091 829815 100775609 100805342 103835541 103862479 100265014 7473176 18099277 11430244 107913068 121209709 106411049 106389810 102626538 4333909 100275187 123095899 123090874 123447516 8062271 100840876 5723659
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