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Orthologous genes in OrthoFinder**

Species Gene Description
 sot-r.1   102602355   protein ROOT PRIMORDIUM DEFECTIVE 1 
 sly-u.5   101248441   protein ROOT PRIMORDIUM DEFECTIVE 1 
 nta-r.1   107777977   protein ROOT PRIMORDIUM DEFECTIVE 1-like 
 nta-r.1   107799291   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ath-u.5   AT5G45790   Ubiquitin carboxyl-terminal hydrolase family protein 
 gma-u.5   100789857   protein ROOT PRIMORDIUM DEFECTIVE 1 
 bra-r.6   103827772   protein ROOT PRIMORDIUM DEFECTIVE 1 
 vvi-u.5   100243149   protein ROOT PRIMORDIUM DEFECTIVE 1 
 mtr-u.5   25499000   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ghi-r.1   107922417   protein ROOT PRIMORDIUM DEFECTIVE 1 
 ghi-r.1   121228873   protein ROOT PRIMORDIUM DEFECTIVE 1 
 bna-r.1   111198773   protein ROOT PRIMORDIUM DEFECTIVE 1-like 
 bna-r.1   111208735   protein ROOT PRIMORDIUM DEFECTIVE 1-like 
 cit-r.1   102617783   protein ROOT PRIMORDIUM DEFECTIVE 1 
 osa-u.5   9267918   protein ROOT PRIMORDIUM DEFECTIVE 1 
 zma-u.5   103640669   protein ROOT PRIMORDIUM DEFECTIVE 1-like 
 zma-u.5   100502365   uncharacterized LOC100502365 
 hvu-r.1   123448190   protein ROOT PRIMORDIUM DEFECTIVE 1 
 sbi-r.1   8071429   protein ROOT PRIMORDIUM DEFECTIVE 1 
 bdi-r.1   100836990   protein ROOT PRIMORDIUM DEFECTIVE 1 

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Top 50 coexpressed genes to 102602355 (sot-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102602355 (sot-r.1 coexpression data)

CoexMap"102602355"


sotLOC102602355 | Entrez gene ID : 102602355      
Species sot sly nta ath gma bra vvi mtr ghi bna cit osa zma hvu sbi bdi ppo cre tae
Paralog 1 1 2 1 1 1 1 1 2 2 1 1 2 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1335 genes)  IEA  
Protein XP_006364762.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  pero 4,  mito 1  (predict for XP_006364762.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_006364762.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sot-r.1
for
102602355
sly-u.5
for
101248441
nta-r.1
for
107777977
nta-r.1
for
107799291
ath-u.5
for
AT5G45790
gma-u.5
for
100789857
bra-r.6
for
103827772
vvi-u.5
for
100243149
mtr-u.5
for
25499000
ghi-r.1
for
107922417
ghi-r.1
for
121228873
bna-r.1
for
111198773
bna-r.1
for
111208735
cit-r.1
for
102617783
osa-u.5
for
9267918
zma-u.5
for
103640669
zma-u.5
for
100502365
hvu-r.1
for
123448190
sbi-r.1
for
8071429
bdi-r.1
for
100836990


Ortholog ID: 10980
Species sot sly nta nta ath gma bra vvi mtr ghi ghi bna bna cit osa zma zma hvu sbi bdi
Symbol LOC102602355 LOC101248441 LOC107777977 LOC107799291 AT5G45790 LOC100789857 LOC103827772 LOC100243149 LOC25499000 LOC107922417 LOC121228873 LOC111198773 LOC111208735 LOC102617783 LOC9267918 LOC103640669 LOC100502365 LOC123448190 LOC8071429 LOC100836990
Function* protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1-like protein ROOT PRIMORDIUM DEFECTIVE 1 Ubiquitin carboxyl-terminal hydrolase family protein protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1-like protein ROOT PRIMORDIUM DEFECTIVE 1-like protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1-like uncharacterized LOC100502365 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00430 Taurine and hypotaurine metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00510 N-Glycan biosynthesis 2
sbi00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102602355 101248441 107777977 107799291 834619 100789857 103827772 100243149 25499000 107922417 121228873 111198773 111208735 102617783 9267918 103640669 100502365 123448190 8071429 100836990
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