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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102608328   pentatricopeptide repeat-containing protein PNM1, mitochondrial 
 ath-u.5   PNM1   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100808101   pentatricopeptide repeat-containing protein PNM1, mitochondrial 
 gma-u.5   100782387   pentatricopeptide repeat-containing protein PNM1, mitochondrial 
 vvi-u.5   100262070   small ribosomal subunit protein mL104 (rPPR9) 
 ppo-u.5   18106607   pentatricopeptide repeat-containing protein PNM1, mitochondrial 
 mtr-u.5   11442426   pentatricopeptide repeat-containing protein PNM1, mitochondrial 
 sly-u.5   101259522   pentatricopeptide repeat-containing protein 
 osa-u.5   4343842   small ribosomal subunit protein mL104 (rPPR9) 
 zma-u.5   100274849   uncharacterized LOC100274849 

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Top 50 coexpressed genes to 102608328 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102608328 (cit-r.1 coexpression data)

CoexMap"102608328"


citLOC102608328 | Entrez gene ID : 102608328    
Species cit ath gma vvi ppo mtr sly osa zma bdi hvu bra bna sbi ghi sot nta cre tae
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006477702.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 5,  cyto_mito 1,  mito 1  (predict for XP_006477702.2)
Subcellular
localization
TargetP
mito 8  (predict for XP_006477702.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102608328
ath-u.5
for
PNM1
gma-u.5
for
100808101
gma-u.5
for
100782387
vvi-u.5
for
100262070
ppo-u.5
for
18106607
mtr-u.5
for
11442426
sly-u.5
for
101259522
osa-u.5
for
4343842
zma-u.5
for
100274849


Ortholog ID: 11009
Species cit ath bra ghi ghi bna bna gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC102608328 PNM1 LOC103860557 LOC107946554 LOC107951210 LOC106439957 LOC106410618 LOC100782387 LOC100808101 LOC100262070 LOC18106607 LOC11442426 LOC101259522 LOC102585028 LOC107828769 LOC107780218 LOC4343842 LOC100274849 LOC123188009 LOC123052151 LOC123425400 LOC8079012 LOC100838665
Function* pentatricopeptide repeat-containing protein PNM1, mitochondrial Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial-like pentatricopeptide repeat-containing protein PNM1, mitochondrial-like pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial small ribosomal subunit protein mL104 (rPPR9) pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein PNM1, mitochondrial small ribosomal subunit protein mL104 (rPPR9) small ribosomal subunit protein mL104 (rPPR9)-like small ribosomal subunit protein mL104 (rPPR9) uncharacterized LOC100274849 pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma00230 Purine metabolism 2
zma01232 Nucleotide metabolism 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 5
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102608328 836217 103860557 107946554 107951210 106439957 106410618 100782387 100808101 100262070 18106607 11442426 101259522 102585028 107828769 107780218 4343842 100274849 123188009 123052151 123425400 8079012 100838665
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