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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8079012   pentatricopeptide repeat-containing protein PNM1, mitochondrial 
 zma-u.5   100274849   uncharacterized LOC100274849 
 osa-u.5   4343842   small ribosomal subunit protein mL104 (rPPR9) 
 ath-u.5   PNM1   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100808101   pentatricopeptide repeat-containing protein PNM1, mitochondrial 
 gma-u.5   100782387   pentatricopeptide repeat-containing protein PNM1, mitochondrial 
 sly-u.5   101259522   pentatricopeptide repeat-containing protein 
 vvi-u.5   100262070   small ribosomal subunit protein mL104 (rPPR9) 
 ppo-u.5   18106607   pentatricopeptide repeat-containing protein PNM1, mitochondrial 
 mtr-u.5   11442426   pentatricopeptide repeat-containing protein PNM1, mitochondrial 

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Top 50 coexpressed genes to 8079012 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8079012 (sbi-r.1 coexpression data)

CoexMap"8079012"


sbiLOC8079012 | Entrez gene ID : 8079012      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002460979.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4,  cyto_mito 3  (predict for XP_002460979.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_002460979.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8079012

.
zma-u.5
for
100274849

.
osa-u.5
for
4343842

.
ath-u.5
for
PNM1

.
gma-u.5
for
100808101

.
gma-u.5
for
100782387

.
sly-u.5
for
101259522

.
vvi-u.5
for
100262070

.
ppo-u.5
for
18106607

.
mtr-u.5
for
11442426

.


Ortholog ID: 11009
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol PNM1 LOC100782387 LOC100808101 LOC101259522 LOC4343842 LOC100274849 LOC103860557 LOC100262070 LOC18106607 LOC11442426 LOC123188009 LOC123052151 LOC123425400 LOC107946554 LOC107951210 LOC106439957 LOC106410618 LOC8079012 LOC102585028 LOC102608328 LOC100838665 LOC107828769 LOC107780218
Function* Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein small ribosomal subunit protein mL104 (rPPR9) uncharacterized LOC100274849 pentatricopeptide repeat-containing protein PNM1, mitochondrial small ribosomal subunit protein mL104 (rPPR9) pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial-like pentatricopeptide repeat-containing protein PNM1, mitochondrial-like pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial pentatricopeptide repeat-containing protein PNM1, mitochondrial small ribosomal subunit protein mL104 (rPPR9) small ribosomal subunit protein mL104 (rPPR9)-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma00230 Purine metabolism 2
zma01232 Nucleotide metabolism 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 5
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836217 100782387 100808101 101259522 4343842 100274849 103860557 100262070 18106607 11442426 123188009 123052151 123425400 107946554 107951210 106439957 106410618 8079012 102585028 102608328 100838665 107828769 107780218
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