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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102615667   photosystem II repair protein PSB27-H1, chloroplastic 
 ath-u.5   PSB27   photosystem II family protein 
 bra-r.6   103844493   photosystem II repair protein PSB27-H1, chloroplastic 
 bra-r.6   103836610   photosystem II repair protein PSB27-H1, chloroplastic 
 ghi-r.1   121232078   photosystem II repair protein PSB27-H1, chloroplastic 
 ghi-r.1   107946154   photosystem II repair protein PSB27-H1, chloroplastic 
 ghi-r.1   107932612   photosystem II repair protein PSB27-H1, chloroplastic 
 bna-r.1   125591564   photosystem II repair protein PSB27-H1, chloroplastic-like 
 bna-r.1   106423093   photosystem II repair protein PSB27-H1, chloroplastic-like 
 bna-r.1   106401987   photosystem II repair protein PSB27-H1, chloroplastic-like 
 gma-u.5   100787080   photosystem II repair protein PSB27-H1, chloroplastic 
 gma-u.5   100777979   photosystem II repair protein PSB27-H1, chloroplastic 
 vvi-u.5   100263742   photosystem II repair protein PSB27-H1, chloroplastic 
 ppo-u.5   7464661   photosystem II repair protein PSB27-H1, chloroplastic 
 ppo-u.5   7480713   photosystem II repair protein PSB27-H1, chloroplastic 
 mtr-u.5   25487627   photosystem II repair protein PSB27-H1, chloroplastic 
 sly-u.5   101263132   photosystem II repair protein PSB27-H1, chloroplastic 
 sot-r.1   102601299   photosystem II repair protein PSB27-H1, chloroplastic 
 nta-r.1   107832794   photosystem II repair protein PSB27-H1, chloroplastic-like 
 nta-r.1   107831545   photosystem II repair protein PSB27-H1, chloroplastic-like 
 osa-u.5   4332745   photosystem II repair protein PSB27-H1, chloroplastic 
 zma-u.5   100282043   photosystem II 11 kD protein 
 zma-u.5   100281235   photosystem II 11 kD protein 
 tae-r.2   123085784   photosystem II repair protein PSB27-H1, chloroplastic 
 tae-r.2   123097555   photosystem II repair protein PSB27-H1, chloroplastic 
 hvu-r.1   123448714   photosystem II repair protein PSB27-H1, chloroplastic 
 sbi-r.1   8082345   photosystem II repair protein PSB27-H1, chloroplastic 
 bdi-r.1   100827920   photosystem II repair protein PSB27-H1, chloroplastic 
 cre-r.1   CHLRE_05g243800v5   uncharacterized protein 

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Top 50 coexpressed genes to 102615667 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102615667 (cit-r.1 coexpression data)

CoexMap"102615667"


citLOC102615667 | Entrez gene ID : 102615667    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 2 3 3 2 1 2 1 1 1 2 1 2 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit00195 [list] [network] Photosynthesis (73 genes)
GO BP
GO:0010206 [list] [network] photosystem II repair  (3 genes)  IEA  
GO:0010207 [list] [network] photosystem II assembly  (5 genes)  IEA  
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (4 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (25 genes)  IEA  
GO MF
Protein XP_006491639.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_006491639.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_006491639.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102615667
ath-u.5
for
PSB27
bra-r.6
for
103844493
bra-r.6
for
103836610
ghi-r.1
for
121232078
ghi-r.1
for
107946154
ghi-r.1
for
107932612
bna-r.1
for
125591564
bna-r.1
for
106423093
bna-r.1
for
106401987
gma-u.5
for
100787080
gma-u.5
for
100777979
vvi-u.5
for
100263742
ppo-u.5
for
7464661
ppo-u.5
for
7480713
mtr-u.5
for
25487627
sly-u.5
for
101263132
sot-r.1
for
102601299
nta-r.1
for
107832794
nta-r.1
for
107831545
osa-u.5
for
4332745
zma-u.5
for
100282043
zma-u.5
for
100281235
tae-r.2
for
123085784
tae-r.2
for
123097555
hvu-r.1
for
123448714
sbi-r.1
for
8082345
bdi-r.1
for
100827920
cre-r.1
for
CHLRE_05g243800v5


Ortholog ID: 7428
Species cit ath bra bra ghi ghi ghi bna bna bna gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC102615667 PSB27 LOC103844493 LOC103836610 LOC121232078 LOC107946154 LOC107932612 LOC125591564 LOC106423093 LOC106401683 LOC100787080 LOC100777979 LOC100263742 LOC7464661 LOC7480713 LOC25487627 LOC101263132 LOC102601299 LOC107832794 LOC107831545 LOC4332745 LOC100282043 LOC100281235 LOC123085784 LOC123097555 LOC123448714 LOC8082345 LOC100827920 CHLRE_05g243800v5
Function* photosystem II repair protein PSB27-H1, chloroplastic photosystem II family protein photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic-like photosystem II repair protein PSB27-H1, chloroplastic-like photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic-like photosystem II repair protein PSB27-H1, chloroplastic-like photosystem II repair protein PSB27-H1, chloroplastic photosystem II 11 kD protein photosystem II 11 kD protein photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 9
bra00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00196 Photosynthesis - antenna proteins 13
ghi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 11
gma00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 13
sly00190 Oxidative phosphorylation 2
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00195 Photosynthesis 4
nta00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00195 Photosynthesis 4
nta00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 7
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae04146 Peroxisome 6
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae01200 Carbon metabolism 6
tae04146 Peroxisome 6
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 8
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 3
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102615667 839449 103844493 103836610 121232078 107946154 107932612 125591564 106423093 106401683 100787080 100777979 100263742 7464661 7480713 25487627 101263132 102601299 107832794 107831545 4332745 100282043 100281235 123085784 123097555 123448714 8082345 100827920 5726285
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