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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25487627   photosystem II repair protein PSB27-H1, chloroplastic 
 mtr-r.5   25487627   photosystem II repair protein PSB27-H1, chloroplastic 
 gma-u.5   100787080   photosystem II repair protein PSB27-H1, chloroplastic 
 gma-u.5   100777979   photosystem II repair protein PSB27-H1, chloroplastic 
 ppo-u.5   7480713   photosystem II repair protein PSB27-H1, chloroplastic 
 ppo-u.5   7464661   photosystem II repair protein PSB27-H1, chloroplastic 
 ath-u.5   PSB27   photosystem II family protein 
 vvi-u.5   100263742   photosystem II repair protein PSB27-H1, chloroplastic 
 sly-u.5   101263132   photosystem II repair protein PSB27-H1, chloroplastic 
 osa-u.5   4332745   photosystem II repair protein PSB27-H1, chloroplastic 
 zma-u.5   100281235   photosystem II 11 kD protein 
 zma-u.5   100282043   photosystem II 11 kD protein 

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Top 50 coexpressed genes to 25487627 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25487627 (mtr-u.5 coexpression data)

CoexMap"25487627"


mtrLOC25487627 | Entrez gene ID : 25487627      
Species mtr gma ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 2 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr00195 [list] [network] Photosynthesis (100 genes)
GO BP
GO:0010206 [list] [network] photosystem II repair  (4 genes)  IEA  
GO:0010207 [list] [network] photosystem II assembly  (7 genes)  IEA  
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (6 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (37 genes)  IEA  
GO MF
Protein XP_013465064.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_013465064.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_013465064.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25487627

.
mtr-r.5
for
25487627

.
gma-u.5
for
100787080

.
gma-u.5
for
100777979

.
ppo-u.5
for
7480713

.
ppo-u.5
for
7464661

.
ath-u.5
for
PSB27

.
vvi-u.5
for
100263742

.
sly-u.5
for
101263132

.
osa-u.5
for
4332745

.
zma-u.5
for
100281235

.
zma-u.5
for
100282043

.


Ortholog ID: 7428
Species ath gma gma sly osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol PSB27 LOC100787080 LOC100777979 LOC101263132 LOC4332745 LOC100281235 LOC100282043 LOC103844493 LOC103836610 LOC100263742 LOC7480713 LOC7464661 LOC25487627 LOC123097555 LOC123085784 LOC123448714 LOC107946154 LOC107932612 LOC125591564 LOC106423093 CHLRE_05g243800v5 LOC8082345 LOC102601299 LOC102615667 LOC100827920 LOC107832794 LOC107831545
Function* photosystem II family protein photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II 11 kD protein photosystem II 11 kD protein photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic-like photosystem II repair protein PSB27-H1, chloroplastic-like uncharacterized protein photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic-like photosystem II repair protein PSB27-H1, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 11
gma00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 13
sly00190 Oxidative phosphorylation 2
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 9
bra00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae01200 Carbon metabolism 6
tae04146 Peroxisome 6
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 7
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae04146 Peroxisome 6
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 8
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 3
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00195 Photosynthesis 4
nta00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00195 Photosynthesis 4
nta00750 Vitamin B6 metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839449 100787080 100777979 101263132 4332745 100281235 100282043 103844493 103836610 100263742 7480713 7464661 25487627 123097555 123085784 123448714 107946154 107932612 125591564 106423093 5726285 8082345 102601299 102615667 100827920 107832794 107831545
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