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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   PSB27   photosystem II family protein 
 ath-r.7   PSB27   photosystem II family protein 
 ath-m.9   PSB27   photosystem II family protein 
 ath-e.2   PSB27   photosystem II family protein 
 ath-m.4.bio   PSB27   photosystem II family protein 
 ath-m.4.hor   PSB27   photosystem II family protein 
 ath-m.4.lig   PSB27   photosystem II family protein 
 ath-m.4.str   PSB27   photosystem II family protein 
 ath-m.4.tis   PSB27   photosystem II family protein 
 gma-u.5   100787080   photosystem II repair protein PSB27-H1, chloroplastic 
 gma-u.5   100777979   photosystem II repair protein PSB27-H1, chloroplastic 
 vvi-u.5   100263742   photosystem II repair protein PSB27-H1, chloroplastic 
 ppo-u.5   7464661   photosystem II repair protein PSB27-H1, chloroplastic 
 ppo-u.5   7480713   photosystem II repair protein PSB27-H1, chloroplastic 
 mtr-u.5   25487627   photosystem II repair protein PSB27-H1, chloroplastic 
 sly-u.5   101263132   photosystem II repair protein PSB27-H1, chloroplastic 
 osa-u.5   4332745   photosystem II repair protein PSB27-H1, chloroplastic 
 zma-u.5   100282043   photosystem II 11 kD protein 
 zma-u.5   100281235   photosystem II 11 kD protein 

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Top 50 coexpressed genes to PSB27 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to PSB27 (ath-u.5 coexpression data)

CoexMap"839449"


athPSB27 | Entrez gene ID : 839449      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 9 2 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00195 [list] [network] Photosynthesis (77 genes)
GO BP
GO:0010206 [list] [network] photosystem II repair  (13 genes)  IMP  
GO:0071484 [list] [network] cellular response to light intensity  (13 genes)  IMP  
GO:0010207 [list] [network] photosystem II assembly  (27 genes)  IEA  
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (52 genes)  HDA IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA  
GO:0009579 [list] [network] thylakoid  (507 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
Protein NP_563687.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_563687.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_563687.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
PSB27
ath-r.7
for
PSB27
ath-m.9
for
PSB27
ath-e.2
for
PSB27
ath-m.4.bio
for
PSB27
ath-m.4.hor
for
PSB27
ath-m.4.lig
for
PSB27
ath-m.4.str
for
PSB27
ath-m.4.tis
for
PSB27
gma-u.5
for
100787080
gma-u.5
for
100777979
vvi-u.5
for
100263742
ppo-u.5
for
7464661
ppo-u.5
for
7480713
mtr-u.5
for
25487627
sly-u.5
for
101263132
osa-u.5
for
4332745
zma-u.5
for
100282043
zma-u.5
for
100281235


Ortholog ID: 7428
Species ath bra bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol PSB27 LOC103844493 LOC103836610 LOC125591564 LOC106423093 LOC107946154 LOC107932612 LOC102615667 LOC100787080 LOC100777979 LOC100263742 LOC7480713 LOC7464661 LOC25487627 LOC101263132 LOC102601299 LOC107832794 LOC107831545 LOC4332745 LOC100281235 LOC100282043 LOC123097555 LOC123085784 LOC123448714 LOC8082345 LOC100827920 CHLRE_05g243800v5
Function* photosystem II family protein photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic-like photosystem II repair protein PSB27-H1, chloroplastic-like photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic-like photosystem II repair protein PSB27-H1, chloroplastic-like photosystem II repair protein PSB27-H1, chloroplastic photosystem II 11 kD protein photosystem II 11 kD protein photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic photosystem II repair protein PSB27-H1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 12
ath00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 9
bra00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 11
gma00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 7
ppo00196 Photosynthesis - antenna proteins 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 13
sly00190 Oxidative phosphorylation 2
sly00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 11
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00195 Photosynthesis 4
nta00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00195 Photosynthesis 4
nta00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae01200 Carbon metabolism 6
tae04146 Peroxisome 6
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 7
tae00630 Glyoxylate and dicarboxylate metabolism 6
tae04146 Peroxisome 6
tae00250 Alanine, aspartate and glutamate metabolism 3
tae00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00195 Photosynthesis 8
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 3
bdi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839449 103844493 103836610 125591564 106423093 107946154 107932612 102615667 100787080 100777979 100263742 7480713 7464661 25487627 101263132 102601299 107832794 107831545 4332745 100281235 100282043 123097555 123085784 123448714 8082345 100827920 5726285
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