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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102616072   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 ath-u.5   AT4G01030   pentatricopeptide (PPR) repeat-containing protein 
 gma-u.5   100801069   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 gma-u.5   100796795   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 vvi-u.5   100244866   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 ppo-u.5   7492770   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 mtr-u.5   25500716   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 sly-u.5   101244816   pentatricopeptide repeat-containing protein 
 osa-u.5   107277281   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 zma-u.5   103630809   pentatricopeptide repeat-containing protein, mitochondrial-like 

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Top 50 coexpressed genes to 102616072 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102616072 (cit-r.1 coexpression data)

CoexMap"102616072"


citLOC102616072 | Entrez gene ID : 102616072    
Species cit ath gma vvi ppo mtr sly osa zma bdi hvu bra bna sbi ghi sot nta cre tae
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (771 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_052293077.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  vacu 2,  nucl 1,  plas 1,  chlo_mito 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_052293077.1)
Subcellular
localization
TargetP
other 6  (predict for XP_052293077.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102616072
ath-u.5
for
AT4G01030
gma-u.5
for
100801069
gma-u.5
for
100796795
vvi-u.5
for
100244866
ppo-u.5
for
7492770
mtr-u.5
for
25500716
sly-u.5
for
101244816
osa-u.5
for
107277281
zma-u.5
for
103630809


Ortholog ID: 10202
Species cit cit ath bra ghi ghi bna bna gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC102616072 LOC127901016 AT4G01030 LOC103836864 LOC107952945 LOC107954497 LOC106365734 LOC106365637 LOC100801069 LOC100796795 LOC100244866 LOC7492770 LOC25500716 LOC101244816 LOC107062042 LOC107793801 LOC107760323 LOC107277281 LOC103630809 LOC123070047 LOC123148965 LOC123452220 LOC8066540 LOC100846399
Function* pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein, mitochondrial-like pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 3
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102616072 127901016 827926 103836864 107952945 107954497 106365734 106365637 100801069 100796795 100244866 7492770 25500716 101244816 107062042 107793801 107760323 107277281 103630809 123070047 123148965 123452220 8066540 100846399
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