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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107954497   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 ath-u.5   AT4G01030   pentatricopeptide (PPR) repeat-containing protein 
 gma-u.5   100801069   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 gma-u.5   100796795   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 vvi-u.5   100244866   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 ppo-u.5   7492770   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 mtr-u.5   25500716   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 sly-u.5   101244816   pentatricopeptide repeat-containing protein 
 osa-u.5   107277281   pentatricopeptide repeat-containing protein At4g01030, mitochondrial 
 zma-u.5   103630809   pentatricopeptide repeat-containing protein, mitochondrial-like 

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Top 50 coexpressed genes to 107954497 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107954497 (ghi-r.1 coexpression data)

CoexMap"107954497"


ghiLOC107954497 | Entrez gene ID : 107954497    
Species ghi ath gma vvi ppo mtr sly osa zma tae bra bdi sbi nta cit cre hvu sot bna
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (557 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (14879 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016745568.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 3,  nucl 3  (predict for XP_016745568.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_016745568.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107954497

.
ath-u.5
for
AT4G01030

.
gma-u.5
for
100801069

.
gma-u.5
for
100796795

.
vvi-u.5
for
100244866

.
ppo-u.5
for
7492770

.
mtr-u.5
for
25500716

.
sly-u.5
for
101244816

.
osa-u.5
for
107277281

.
zma-u.5
for
103630809

.


Ortholog ID: 10202
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit cit bdi nta nta
Symbol AT4G01030 LOC100801069 LOC100796795 LOC101244816 LOC107277281 LOC103630809 LOC103836864 LOC100244866 LOC7492770 LOC25500716 LOC123070047 LOC123148965 LOC123452220 LOC107952945 LOC107954497 LOC106365734 LOC106365637 LOC8066540 LOC107062042 LOC102616072 LOC127901016 LOC100846399 LOC107793801 LOC107760323
Function* pentatricopeptide (PPR) repeat-containing protein pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein, mitochondrial-like pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 2
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 3
sot03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827926 100801069 100796795 101244816 107277281 103630809 103836864 100244866 7492770 25500716 123070047 123148965 123452220 107952945 107954497 106365734 106365637 8066540 107062042 102616072 127901016 100846399 107793801 107760323
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