ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
nta-r.1	107760323	pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like
nta-r.1	107793801	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
sly-u.5	101244816	pentatricopeptide repeat-containing protein
sot-r.1	107062042	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
ath-u.5	AT4G01030	pentatricopeptide (PPR) repeat-containing protein
gma-u.5	100801069	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
gma-u.5	100796795	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
bra-r.6	103836864	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
vvi-u.5	100244866	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
ppo-u.5	7492770	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
mtr-u.5	25500716	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
ghi-r.1	107954497	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
ghi-r.1	107952945	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
bna-r.1	106365734	pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like
bna-r.1	106365637	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
cit-r.1	102616072	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
cit-r.1	127901016	pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like
osa-u.5	107277281	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
zma-u.5	103630809	pentatricopeptide repeat-containing protein, mitochondrial-like
tae-r.2	123148965	pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like
tae-r.2	123183314	pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like
tae-r.2	123070047	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
hvu-r.1	123452220	pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like
sbi-r.1	8066540	pentatricopeptide repeat-containing protein At4g01030, mitochondrial
bdi-r.1	100846399	pentatricopeptide repeat-containing protein At4g01030, mitochondrial

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(732 genes)

IEA

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding	(2210 genes)	IEA
GO:0003723 [list] [network] RNA binding	(2607 genes)	IEA
GO:0005515 [list] [network] protein binding	(7685 genes)	IEA

Protein

XP_016433842.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, nucl 1, cyto 1, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1, cyto_plas 1

(predict for XP_016433842.2)

Subcellular
localization
TargetP

chlo 7

(predict for XP_016433842.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 107760323	nta-r.1 for 107793801	sly-u.5 for 101244816	sot-r.1 for 107062042	ath-u.5 for AT4G01030	gma-u.5 for 100801069	gma-u.5 for 100796795	bra-r.6 for 103836864	vvi-u.5 for 100244866	ppo-u.5 for 7492770	mtr-u.5 for 25500716	ghi-r.1 for 107954497	ghi-r.1 for 107952945	bna-r.1 for 106365734	bna-r.1 for 106365637	cit-r.1 for 102616072	cit-r.1 for 127901016	osa-u.5 for 107277281	zma-u.5 for 103630809	tae-r.2 for 123148965	tae-r.2 for 123183314	tae-r.2 for 123070047	hvu-r.1 for 123452220	sbi-r.1 for 8066540	bdi-r.1 for 100846399

Ortholog

Ortholog ID: 10202

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

pentatricopeptide repeat-containing protein At4g01030, mitochondrial-like