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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102617524   suppressor of RPS4-RLD 1 
 ath-u.5   SRFR1   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103859664   suppressor of RPS4-RLD 1 
 ghi-r.1   121209914   suppressor of RPS4-RLD 1 
 ghi-r.1   107900153   suppressor of RPS4-RLD 1 
 bna-r.1   106440740   suppressor of RPS4-RLD 1-like 
 bna-r.1   106426864   suppressor of RPS4-RLD 1 
 gma-u.5   100815327   suppressor of RPS4-RLD 1 
 gma-u.5   100808879   suppressor of RPS4-RLD 1 
 gma-u.5   100803316   suppressor of RPS4-RLD 1 
 vvi-u.5   100264606   suppressor of RPS4-RLD 1 
 ppo-u.5   18101141   suppressor of RPS4-RLD 1 
 mtr-u.5   11411921   suppressor of RPS4-RLD 1 
 sly-u.5   101252448   suppressor of RPS4-RLD 1 
 sot-r.1   102598556   suppressor of RPS4-RLD 1 
 nta-r.1   107800615   suppressor of RPS4-RLD 1 
 nta-r.1   107791960   suppressor of RPS4-RLD 1 
 osa-u.5   4342244   suppressor of RPS4-RLD 1 
 zma-u.5   103648284   suppressor of RPS4-RLD 1 
 tae-r.2   123188870   suppressor of RPS4-RLD 1 
 tae-r.2   123052931   suppressor of RPS4-RLD 1 
 tae-r.2   123045095   suppressor of RPS4-RLD 1 
 hvu-r.1   123426339   suppressor of RPS4-RLD 1 
 sbi-r.1   110432820   suppressor of RPS4-RLD 1 
 bdi-r.1   100841566   suppressor of RPS4-RLD 1 
 cre-r.1   CHLRE_01g021450v5   uncharacterized protein 

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Top 50 coexpressed genes to 102617524 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102617524 (cit-r.1 coexpression data)

CoexMap"102617524"


citLOC102617524 | Entrez gene ID : 102617524    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 1 2 2 3 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045892 [list] [network] negative regulation of DNA-templated transcription  (49 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006466508.2 [sequence] [blastp]
XP_006466509.2 [sequence] [blastp]
XP_024951185.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  mito 1,  plas 1,  mito_plas 1  (predict for XP_006466508.2)
chlo 4,  nucl 2,  mito 1,  plas 1,  mito_plas 1  (predict for XP_006466509.2)
chlo 4,  nucl 2,  mito 1,  plas 1,  mito_plas 1  (predict for XP_024951185.2)
Subcellular
localization
TargetP
mito 4  (predict for XP_006466508.2)
mito 4  (predict for XP_006466509.2)
mito 4  (predict for XP_024951185.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102617524
ath-u.5
for
SRFR1
bra-r.6
for
103859664
ghi-r.1
for
121209914
ghi-r.1
for
107900153
bna-r.1
for
106440740
bna-r.1
for
106426864
gma-u.5
for
100815327
gma-u.5
for
100808879
gma-u.5
for
100803316
vvi-u.5
for
100264606
ppo-u.5
for
18101141
mtr-u.5
for
11411921
sly-u.5
for
101252448
sot-r.1
for
102598556
nta-r.1
for
107800615
nta-r.1
for
107791960
osa-u.5
for
4342244
zma-u.5
for
103648284
tae-r.2
for
123188870
tae-r.2
for
123052931
tae-r.2
for
123045095
hvu-r.1
for
123426339
sbi-r.1
for
110432820
bdi-r.1
for
100841566
cre-r.1
for
CHLRE_01g021450v5


Ortholog ID: 9627
Species cit ath bra ghi ghi bna bna gma gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC102617524 SRFR1 LOC103859664 LOC121209914 LOC107900153 LOC106440740 LOC106426864 LOC100815327 LOC100808879 LOC100803316 LOC100264606 LOC18101141 LOC11411921 LOC101252448 LOC102598556 LOC107800615 LOC107791960 LOC4342244 LOC103648284 LOC123188870 LOC123052931 LOC123045095 LOC123426339 LOC110432820 LOC100841566 CHLRE_01g021450v5
Function* suppressor of RPS4-RLD 1 Tetratricopeptide repeat (TPR)-like superfamily protein suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1-like suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 suppressor of RPS4-RLD 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi04141 Protein processing in endoplasmic reticulum 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
ghi03013 Nucleocytoplasmic transport 4
ghi03015 mRNA surveillance pathway 4
ghi04141 Protein processing in endoplasmic reticulum 3
ghi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma04148 Efferocytosis 3
gma00562 Inositol phosphate metabolism 3
gma04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma04146 Peroxisome 2
gma00511 Other glycan degradation 2
gma00600 Sphingolipid metabolism 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03083 Polycomb repressive complex 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly03250 Viral life cycle - HIV-1 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00270 Cysteine and methionine metabolism 2
osa00480 Glutathione metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 3
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 8
cre04141 Protein processing in endoplasmic reticulum 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102617524 829901 103859664 121209914 107900153 106440740 106426864 100815327 100808879 100803316 100264606 18101141 11411921 101252448 102598556 107800615 107791960 4342244 103648284 123188870 123052931 123045095 123426339 110432820 100841566 5715211
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