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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102620162   serine/threonine-protein kinase ATM 
 ath-u.5   ATM   Serine/Threonine-kinase ATM-like protein 
 gma-u.5   100788458   serine/threonine-protein kinase ATM 
 vvi-u.5   100250198   serine/threonine-protein kinase ATM 
 ppo-u.5   7454490   serine/threonine-protein kinase ATM 
 mtr-u.5   11443014   serine/threonine-protein kinase ATM 
 sly-u.5   101253578   serine/threonine-protein kinase ATM 
 osa-u.5   4326151   serine/threonine-protein kinase ATM 
 zma-u.5   103651852   serine/threonine-protein kinase ATM 

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Top 50 coexpressed genes to 102620162 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102620162 (cit-r.1 coexpression data)

CoexMap"102620162"


citLOC102620162 | Entrez gene ID : 102620162    
Species cit ath gma vvi ppo mtr sly osa zma hvu bna bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cit03440 [list] [network] Homologous recombination (45 genes)
GO BP
GO:0006281 [list] [network] DNA repair  (225 genes)  IEA  
GO CC
GO MF
GO:0004674 [list] [network] protein serine/threonine kinase activity  (338 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006476780.2 [sequence] [blastp]
XP_015385279.2 [sequence] [blastp]
XP_024954513.2 [sequence] [blastp]
XP_024954514.2 [sequence] [blastp]
XP_024954515.2 [sequence] [blastp]
XP_024954516.2 [sequence] [blastp]
XP_024954519.2 [sequence] [blastp]
XP_024954520.2 [sequence] [blastp]
XP_052293156.1 [sequence] [blastp]
XP_052293157.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 7,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_006476780.2)
plas 7,  nucl 1,  mito 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_015385279.2)
plas 7,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_024954513.2)
plas 7,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_024954514.2)
plas 7,  nucl 1,  mito 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_024954515.2)
plas 7,  nucl 1,  mito 1,  E.R. 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_024954516.2)
plas 6,  E.R. 1,  nucl 1,  mito 1,  vacu 1,  cyto_E.R. 1  (predict for XP_024954519.2)
plas 6,  E.R. 1,  nucl 1,  mito 1,  vacu 1,  cyto_E.R. 1  (predict for XP_024954520.2)
plas 7,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_052293156.1)
plas 8,  nucl 1,  mito 1,  E.R. 1  (predict for XP_052293157.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006476780.2)
other 9  (predict for XP_015385279.2)
other 9  (predict for XP_024954513.2)
other 9  (predict for XP_024954514.2)
other 9  (predict for XP_024954515.2)
other 9  (predict for XP_024954516.2)
scret 7,  other 4  (predict for XP_024954519.2)
scret 8  (predict for XP_024954520.2)
other 9  (predict for XP_052293156.1)
other 9  (predict for XP_052293157.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102620162
ath-u.5
for
ATM
gma-u.5
for
100788458
vvi-u.5
for
100250198
ppo-u.5
for
7454490
mtr-u.5
for
11443014
sly-u.5
for
101253578
osa-u.5
for
4326151
zma-u.5
for
103651852


Ortholog ID: 10137
Species cit ath bra ghi ghi bna bna gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC102620162 ATM LOC103873550 LOC107892485 LOC121206048 LOC111199007 LOC106434303 LOC100788458 LOC100250198 LOC7454490 LOC11443014 LOC101253578 LOC102596182 LOC107763003 LOC107828155 LOC4326151 LOC103651852 LOC123139615 LOC123062353 LOC123442347 LOC8072354 LOC100845900 CHLRE_13g564350v5
Function* serine/threonine-protein kinase ATM Serine/Threonine-kinase ATM-like protein serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM serine/threonine-protein kinase ATM uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi03013 Nucleocytoplasmic transport 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi03082 ATP-dependent chromatin remodeling 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 4
bna03450 Non-homologous end-joining 4
bna03420 Nucleotide excision repair 2
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03440 Homologous recombination 4
bna03450 Non-homologous end-joining 4
bna03420 Nucleotide excision repair 2
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo04136 Autophagy - other 2
ppo04518 Integrin signaling 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03440 Homologous recombination 4
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03440 Homologous recombination 4
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102620162 823975 103873550 107892485 121206048 111199007 106434303 100788458 100250198 7454490 11443014 101253578 102596182 107763003 107828155 4326151 103651852 123139615 123062353 123442347 8072354 100845900 5719003
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