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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102622085   pentatricopeptide repeat-containing protein At5g50990 
 ath-u.5   AT5G50990   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103852171   pentatricopeptide repeat-containing protein At5g50990 
 ghi-r.1   107946620   pentatricopeptide repeat-containing protein At5g50990 
 bna-r.1   106361174   pentatricopeptide repeat-containing protein At5g50990 
 bna-r.1   106406356   pentatricopeptide repeat-containing protein At5g50990 
 gma-u.5   100788229   pentatricopeptide repeat-containing protein At5g50990 
 vvi-u.5   100247459   pentatricopeptide repeat-containing protein At5g50990 
 ppo-u.5   7484345   pentatricopeptide repeat-containing protein At5g50990 
 mtr-u.5   25488109   pentatricopeptide repeat-containing protein At5g50990 
 sly-u.5   101249092   pentatricopeptide repeat-containing protein At5g50990 
 sot-r.1   102590191   pentatricopeptide repeat-containing protein At5g50990 
 nta-r.1   107807822   pentatricopeptide repeat-containing protein At5g50990 
 nta-r.1   142161666   pentatricopeptide repeat-containing protein At5g50990-like 
 tae-r.2   123097710   pentatricopeptide repeat-containing protein At5g50990 
 tae-r.2   123092392   pentatricopeptide repeat-containing protein At5g50990 
 hvu-r.1   123448853   pentatricopeptide repeat-containing protein At5g50990-like 
 sbi-r.1   8081099   pentatricopeptide repeat-containing protein At5g50990 
 bdi-r.1   100841161   pentatricopeptide repeat-containing protein At5g50990 

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Top 50 coexpressed genes to 102622085 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102622085 (cit-r.1 coexpression data)

CoexMap"102622085"


citLOC102622085 | Entrez gene ID : 102622085    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta tae hvu sbi bdi zma osa cre
Paralog 1 1 1 1 2 1 1 1 1 1 1 2 2 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (771 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1476 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006485077.1 [sequence] [blastp]
XP_006485078.2 [sequence] [blastp]
XP_052296060.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  cyto 2,  mito 1,  cyto_nucl 1,  cyto_plas 1  (predict for XP_006485077.1)
mito 4,  chlo 3,  nucl 2,  cyto_mito 2,  mito_plas 2  (predict for XP_006485078.2)
mito 4,  chlo 3,  nucl 2,  cyto_mito 2,  mito_plas 2  (predict for XP_052296060.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_006485077.1)
mito 6,  chlo 5  (predict for XP_006485078.2)
mito 6,  chlo 5  (predict for XP_052296060.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102622085
ath-u.5
for
AT5G50990
bra-r.6
for
103852171
ghi-r.1
for
107946620
bna-r.1
for
106361174
bna-r.1
for
106406356
gma-u.5
for
100788229
vvi-u.5
for
100247459
ppo-u.5
for
7484345
mtr-u.5
for
25488109
sly-u.5
for
101249092
sot-r.1
for
102590191
nta-r.1
for
107807822
nta-r.1
for
142161666
tae-r.2
for
123097710
tae-r.2
for
123092392
hvu-r.1
for
123448853
sbi-r.1
for
8081099
bdi-r.1
for
100841161


Ortholog ID: 12240
Species cit ath bra ghi bna bna gma vvi ppo mtr sly sot nta nta tae tae hvu sbi bdi
Symbol LOC102622085 AT5G50990 LOC103852171 LOC107946620 LOC106361174 LOC106406356 LOC100788229 LOC100247459 LOC7484345 LOC25488109 LOC101249092 LOC102590191 LOC107807822 LOC142161666 LOC123097710 LOC123092392 LOC123448853 LOC8081099 LOC100841161
Function* pentatricopeptide repeat-containing protein At5g50990 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990-like pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990-like pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 6
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 6
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102622085 835172 103852171 107946620 106361174 106406356 100788229 100247459 7484345 25488109 101249092 102590191 107807822 142161666 123097710 123092392 123448853 8081099 100841161
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