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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107807822   pentatricopeptide repeat-containing protein At5g50990 
 sly-u.5   101249092   pentatricopeptide repeat-containing protein At5g50990 
 ath-u.5   AT5G50990   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100788229   pentatricopeptide repeat-containing protein At5g50990 
 vvi-u.5   100247459   pentatricopeptide repeat-containing protein At5g50990 
 ppo-u.5   7484345   pentatricopeptide repeat-containing protein At5g50990 
 mtr-u.5   25488109   pentatricopeptide repeat-containing protein At5g50990 

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Top 50 coexpressed genes to 107807822 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107807822 (nta-r.1 coexpression data)

CoexMap"107807822"


ntaLOC107807822 | Entrez gene ID : 107807822      
Species nta sly ath gma vvi ppo mtr bdi hvu bra cit bna sbi ghi osa sot cre tae zma
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016487742.2 [sequence] [blastp]
XP_016487743.2 [sequence] [blastp]
XP_016487745.2 [sequence] [blastp]
XP_016487746.2 [sequence] [blastp]
XP_016487747.2 [sequence] [blastp]
XP_075099640.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_016487742.2)
chlo 4,  mito 4,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_016487743.2)
chlo 4,  mito 4,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_016487745.2)
chlo 4,  mito 4,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_016487746.2)
chlo 4,  mito 4,  nucl 1,  cyto 1,  E.R. 1,  cyto_nucl 1,  cyto_E.R. 1  (predict for XP_016487747.2)
extr 4,  chlo 2,  cyto 1,  chlo_mito 1,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_075099640.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_016487742.2)
mito 9  (predict for XP_016487743.2)
mito 9  (predict for XP_016487745.2)
mito 9  (predict for XP_016487746.2)
mito 9  (predict for XP_016487747.2)
scret 9,  other 4  (predict for XP_075099640.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107807822
sly-u.5
for
101249092
ath-u.5
for
AT5G50990
gma-u.5
for
100788229
vvi-u.5
for
100247459
ppo-u.5
for
7484345
mtr-u.5
for
25488109


Ortholog ID: 12240
Species nta nta sly sot ath gma bra vvi ppo mtr ghi bna bna cit tae tae hvu sbi bdi
Symbol LOC142161666 LOC107807822 LOC101249092 LOC102590191 AT5G50990 LOC100788229 LOC103852171 LOC100247459 LOC7484345 LOC25488109 LOC107946620 LOC106361174 LOC106406356 LOC102622085 LOC123097710 LOC123092392 LOC123448853 LOC8081099 LOC100841161
Function* pentatricopeptide repeat-containing protein At5g50990-like pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990-like pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 6
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 6
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 142161666 107807822 101249092 102590191 835172 100788229 103852171 100247459 7484345 25488109 107946620 106361174 106406356 102622085 123097710 123092392 123448853 8081099 100841161
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