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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8081099   pentatricopeptide repeat-containing protein At5g50990 
 ath-u.5   AT5G50990   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100788229   pentatricopeptide repeat-containing protein At5g50990 
 sly-u.5   101249092   pentatricopeptide repeat-containing protein At5g50990 
 vvi-u.5   100247459   pentatricopeptide repeat-containing protein At5g50990 
 ppo-u.5   7484345   pentatricopeptide repeat-containing protein At5g50990 
 mtr-u.5   25488109   pentatricopeptide repeat-containing protein At5g50990 

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Top 50 coexpressed genes to 8081099 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8081099 (sbi-r.1 coexpression data)

CoexMap"8081099"


sbiLOC8081099 | Entrez gene ID : 8081099    
Species sbi ath gma sly vvi ppo mtr bra nta osa cre cit hvu bdi sot zma tae bna ghi
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006308 [list] [network] DNA catabolic process  (9 genes)  IEA  
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0008296 [list] [network] 3'-5'-DNA exonuclease activity  (10 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021306672.1 [sequence] [blastp]
XP_021306673.1 [sequence] [blastp]
XP_021306674.1 [sequence] [blastp]
XP_021306675.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 4,  nucl 2  (predict for XP_021306672.1)
chlo 7,  chlo_mito 4,  nucl 2  (predict for XP_021306673.1)
chlo 7,  chlo_mito 4,  nucl 2  (predict for XP_021306674.1)
chlo 8,  mito 1,  cyto_mito 1  (predict for XP_021306675.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_021306672.1)
chlo 7  (predict for XP_021306673.1)
chlo 7  (predict for XP_021306674.1)
mito 6,  other 4  (predict for XP_021306675.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8081099

.
ath-u.5
for
AT5G50990

.
gma-u.5
for
100788229

.
sly-u.5
for
101249092

.
vvi-u.5
for
100247459

.
ppo-u.5
for
7484345

.
mtr-u.5
for
25488109

.


Ortholog ID: 12240
Species ath gma sly bra vvi ppo mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol AT5G50990 LOC100788229 LOC101249092 LOC103852171 LOC100247459 LOC7484345 LOC25488109 LOC123097710 LOC123092392 LOC123448853 LOC107946620 LOC106361174 LOC106406356 LOC8081099 LOC102590191 LOC102622085 LOC100841161 LOC142161666 LOC107807822
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990-like pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990 pentatricopeptide repeat-containing protein At5g50990-like pentatricopeptide repeat-containing protein At5g50990
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 6
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 6
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835172 100788229 101249092 103852171 100247459 7484345 25488109 123097710 123092392 123448853 107946620 106361174 106406356 8081099 102590191 102622085 100841161 142161666 107807822
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