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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102627422   pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like 
 ath-u.5   AT3G62470   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT3G62540   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT5G14820   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100818966   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 gma-u.5   100780195   pentatricopeptide repeat-containing protein At5g14820, mitochondrial 
 vvi-u.5   100253720   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 ppo-u.5   7495218   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 mtr-u.5   25486008   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 sly-u.5   101256809   pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like 
 zma-u.5   103635573   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 zma-u.5   100284086   uncharacterized LOC100284086 

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Top 50 coexpressed genes to 102627422 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102627422 (cit-r.1 coexpression data)

CoexMap"102627422"


citLOC102627422 | Entrez gene ID : 102627422    
Species cit ath gma vvi ppo mtr sly zma bdi hvu bra bna sbi ghi osa sot nta cre tae
Paralog 1 3 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006492325.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_006492325.2)
Subcellular
localization
TargetP
mito 7  (predict for XP_006492325.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102627422
ath-u.5
for
AT3G62470
ath-u.5
for
AT3G62540
ath-u.5
for
AT5G14820
gma-u.5
for
100818966
gma-u.5
for
100780195
vvi-u.5
for
100253720
ppo-u.5
for
7495218
mtr-u.5
for
25486008
sly-u.5
for
101256809
zma-u.5
for
103635573
zma-u.5
for
100284086


Ortholog ID: 8520
Species cit ath ath bra ghi ghi bna bna gma gma vvi ppo mtr sly sot nta nta zma zma tae tae hvu sbi bdi
Symbol LOC102627422 AT3G62470 AT3G62540 LOC103842061 LOC121202950 LOC107940290 LOC106368520 LOC106451988 LOC100818966 LOC100780195 LOC100253720 LOC7495218 LOC25486008 LOC101256809 LOC102606201 LOC107805629 LOC107802560 LOC103635573 LOC100284086 LOC123052813 LOC123129200 LOC123440979 LOC8061889 LOC100838680
Function* pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At5g14820, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial uncharacterized LOC100284086 pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 3
bra03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 4
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
bna00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 5
bdi01230 Biosynthesis of amino acids 5
bdi00260 Glycine, serine and threonine metabolism 4
bdi01200 Carbon metabolism 4
bdi01240 Biosynthesis of cofactors 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102627422 825421 825428 103842061 121202950 107940290 106368520 106451988 100818966 100780195 100253720 7495218 25486008 101256809 102606201 107805629 107802560 103635573 100284086 123052813 123129200 123440979 8061889 100838680
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