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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7495218   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 ppo-r.4   7495218   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 gma-u.5   100818966   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 gma-u.5   100780195   pentatricopeptide repeat-containing protein At5g14820, mitochondrial 
 mtr-u.5   25486008   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 ath-u.5   AT3G62470   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT3G62540   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT5G14820   Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5   100253720   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 sly-u.5   101256809   pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like 
 zma-u.5   103635573   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 zma-u.5   100284086   uncharacterized LOC100284086 

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Top 50 coexpressed genes to 7495218 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7495218 (ppo-u.5 coexpression data)

CoexMap"7495218"


ppoLOC7495218 | Entrez gene ID : 7495218    
Species ppo gma mtr ath vvi sly zma sbi nta bra osa cre cit hvu bdi sot tae bna ghi
Paralog 2 2 1 3 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024440843.1 [sequence] [blastp]
XP_052303099.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3  (predict for XP_024440843.1)
chlo 6,  mito 3  (predict for XP_052303099.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_024440843.1)
mito 6  (predict for XP_052303099.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7495218

.
ppo-r.4
for
7495218

.
gma-u.5
for
100818966

.
gma-u.5
for
100780195

.
mtr-u.5
for
25486008

.
ath-u.5
for
AT3G62470

.
ath-u.5
for
AT3G62540

.
ath-u.5
for
AT5G14820

.
vvi-u.5
for
100253720

.
sly-u.5
for
101256809

.
zma-u.5
for
103635573

.
zma-u.5
for
100284086

.


Ortholog ID: 8520
Species ath ath gma gma sly zma zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G62470 AT3G62540 LOC100818966 LOC100780195 LOC101256809 LOC103635573 LOC100284086 LOC103842061 LOC100253720 LOC7495218 LOC25486008 LOC123052813 LOC123129200 LOC123440979 LOC121202950 LOC107940290 LOC106368520 LOC106451988 LOC8061889 LOC102606201 LOC102627422 LOC100838680 LOC107805629 LOC107802560
Function* Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At5g14820, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial uncharacterized LOC100284086 pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 3
bra03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 4
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
bna00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 5
bdi01230 Biosynthesis of amino acids 5
bdi00260 Glycine, serine and threonine metabolism 4
bdi01200 Carbon metabolism 4
bdi01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825421 825428 100818966 100780195 101256809 103635573 100284086 103842061 100253720 7495218 25486008 123052813 123129200 123440979 121202950 107940290 106368520 106451988 8061889 102606201 102627422 100838680 107805629 107802560
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