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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107805629   pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like 
 nta-r.1   107802560   pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like 
 nta-r.1   142161861   pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like 
 sly-u.5   101256809   pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like 
 sot-r.1   102606201   pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like 
 ath-u.5   AT3G62470   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT3G62540   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-u.5   AT5G14820   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100818966   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 gma-u.5   100780195   pentatricopeptide repeat-containing protein At5g14820, mitochondrial 
 bra-r.6   103842061   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 vvi-u.5   100253720   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 ppo-u.5   7495218   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 mtr-u.5   25486008   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 ghi-r.1   107940290   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 ghi-r.1   121202950   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 bna-r.1   106368520   pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like 
 bna-r.1   106451988   pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like 
 cit-r.1   102627422   pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like 
 zma-u.5   103635573   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 zma-u.5   100284086   uncharacterized LOC100284086 
 tae-r.2   123052813   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 tae-r.2   123181736   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 tae-r.2   123129200   pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like 
 hvu-r.1   123440979   pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like 
 sbi-r.1   8061889   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 
 bdi-r.1   100838680   pentatricopeptide repeat-containing protein At3g62470, mitochondrial 

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Top 50 coexpressed genes to 107805629 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107805629 (nta-r.1 coexpression data)

CoexMap"107805629"


ntaLOC107805629 | Entrez gene ID : 107805629      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit zma tae hvu sbi bdi osa cre
Paralog 3 1 1 3 2 1 1 1 1 2 2 1 2 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_075073771.1 [sequence] [blastp]
XP_075073772.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 1,  nucl 1  (predict for XP_075073771.1)
cyto 6,  chlo 1,  nucl 1  (predict for XP_075073772.1)
Subcellular
localization
TargetP
other 4,  scret 3  (predict for XP_075073771.1)
other 4,  scret 3  (predict for XP_075073772.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107805629
nta-r.1
for
107802560
nta-r.1
for
142161861
sly-u.5
for
101256809
sot-r.1
for
102606201
ath-u.5
for
AT3G62470
ath-u.5
for
AT3G62540
ath-u.5
for
AT5G14820
gma-u.5
for
100818966
gma-u.5
for
100780195
bra-r.6
for
103842061
vvi-u.5
for
100253720
ppo-u.5
for
7495218
mtr-u.5
for
25486008
ghi-r.1
for
107940290
ghi-r.1
for
121202950
bna-r.1
for
106368520
bna-r.1
for
106451988
cit-r.1
for
102627422
zma-u.5
for
103635573
zma-u.5
for
100284086
tae-r.2
for
123052813
tae-r.2
for
123181736
tae-r.2
for
123129200
hvu-r.1
for
123440979
sbi-r.1
for
8061889
bdi-r.1
for
100838680


Ortholog ID: 8520
Species nta nta nta sly sot ath ath ath gma gma bra vvi ppo mtr ghi ghi bna bna cit zma zma tae tae tae hvu sbi bdi
Symbol LOC107805629 LOC107802560 LOC142161861 LOC101256809 LOC102606201 AT3G62470 AT3G62540 AT5G14820 LOC100818966 LOC100780195 LOC103842061 LOC100253720 LOC7495218 LOC25486008 LOC107940290 LOC121202950 LOC106368520 LOC106451988 LOC102627422 LOC103635573 LOC100284086 LOC123052813 LOC123181736 LOC123129200 LOC123440979 LOC8061889 LOC100838680
Function* pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At5g14820, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial uncharacterized LOC100284086 pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial-like pentatricopeptide repeat-containing protein At3g62470, mitochondrial pentatricopeptide repeat-containing protein At3g62470, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta00510 N-Glycan biosynthesis 2
nta00513 Various types of N-glycan biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 3
bra03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 4
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
bna00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 5
bdi01230 Biosynthesis of amino acids 5
bdi00260 Glycine, serine and threonine metabolism 4
bdi01200 Carbon metabolism 4
bdi01240 Biosynthesis of cofactors 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107805629 107802560 142161861 101256809 102606201 825421 825428 831334 100818966 100780195 103842061 100253720 7495218 25486008 107940290 121202950 106368520 106451988 102627422 103635573 100284086 123052813 123181736 123129200 123440979 8061889 100838680
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