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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102629159   PHD finger protein EHD3 
 ath-u.5   AT1G77250   RING/FYVE/PHD-type zinc finger family protein 
 bra-r.6   103832177   PHD finger protein EHD3 
 bra-r.6   103830573   PHD finger protein EHD3 
 ghi-r.1   107960383   PHD finger protein EHD3 
 ghi-r.1   107960385   PHD finger protein EHD3 
 ghi-r.1   107915205   PHD finger protein EHD3 
 bna-r.1   111213906   PHD finger protein EHD3 
 bna-r.1   111213062   PHD finger protein EHD3-like 
 bna-r.1   106354621   PHD finger protein EHD3 
 gma-u.5   100810450   PHD finger protein EHD3 
 gma-u.5   100795906   PHD finger protein EHD3 
 vvi-u.5   100247132   PHD finger protein EHD3 
 ppo-u.5   7460982   PHD finger protein EHD3 
 ppo-u.5   7466438   PHD finger protein EHD3 
 mtr-u.5   25489715   PHD finger protein EHD3 
 sly-u.5   101244658   PHD finger protein EHD3 
 sot-r.1   102599910   uncharacterized LOC102599910 
 nta-r.1   107810514   PHD finger protein EHD3 
 nta-r.1   107768750   PHD finger protein EHD3 
 osa-u.5   4344443   PHD finger protein EHD3-like 
 zma-u.5   103650916   PHD finger protein EHD3 
 zma-u.5   100383733   RING/FYVE/PHD-type zinc finger family protein 
 zma-u.5   100281389   uncharacterized LOC100281389 
 tae-r.2   123147651   PHD finger protein EHD3 
 tae-r.2   123156210   PHD finger protein EHD3 
 tae-r.2   123165669   PHD finger protein EHD3 
 hvu-r.1   123409698   PHD finger protein EHD3-like 
 sbi-r.1   8063143   PHD finger protein EHD3 
 sbi-r.1   8068510   PHD finger protein EHD3 
 bdi-r.1   100838909   PHD finger protein EHD3 
 cre-r.1   CHLRE_08g380151v5   uncharacterized protein 

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Top 50 coexpressed genes to 102629159 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102629159 (cit-r.1 coexpression data)

CoexMap"102629159"


citLOC102629159 | Entrez gene ID : 102629159    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 1 2 3 3 2 1 2 1 1 1 2 1 3 3 1 2 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_006472875.2 [sequence] [blastp]
XP_024952608.2 [sequence] [blastp]
XP_052297860.1 [sequence] [blastp]
XP_052297861.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_006472875.2)
nucl 9  (predict for XP_024952608.2)
nucl 9  (predict for XP_052297860.1)
nucl 9  (predict for XP_052297861.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006472875.2)
other 7  (predict for XP_024952608.2)
other 9  (predict for XP_052297860.1)
other 7  (predict for XP_052297861.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102629159
ath-u.5
for
AT1G77250
bra-r.6
for
103832177
bra-r.6
for
103830573
ghi-r.1
for
107960383
ghi-r.1
for
107960385
ghi-r.1
for
107915205
bna-r.1
for
111213906
bna-r.1
for
111213062
bna-r.1
for
106354621
gma-u.5
for
100810450
gma-u.5
for
100795906
vvi-u.5
for
100247132
ppo-u.5
for
7460982
ppo-u.5
for
7466438
mtr-u.5
for
25489715
sly-u.5
for
101244658
sot-r.1
for
102599910
nta-r.1
for
107810514
nta-r.1
for
107768750
osa-u.5
for
4344443
zma-u.5
for
103650916
zma-u.5
for
100383733
zma-u.5
for
100281389
tae-r.2
for
123147651
tae-r.2
for
123156210
tae-r.2
for
123165669
hvu-r.1
for
123409698
sbi-r.1
for
8063143
sbi-r.1
for
8068510
bdi-r.1
for
100838909
cre-r.1
for
CHLRE_08g380151v5


Ortholog ID: 5433
Species cit ath bra bra ghi ghi ghi bna bna bna gma gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma zma tae tae tae hvu sbi sbi bdi cre
Symbol LOC102629159 AT1G77250 LOC103832177 LOC103830573 LOC107960383 LOC107960385 LOC107915204 LOC111213906 LOC111213062 LOC106353486 LOC100810450 LOC100795906 LOC100786712 LOC100247132 LOC7460982 LOC7466438 LOC25489715 LOC101244658 LOC102599910 LOC107810514 LOC107768750 LOC4344443 LOC103650916 LOC100383733 LOC100281389 LOC123147651 LOC123156210 LOC123165669 LOC123409698 LOC8063143 LOC8068510 LOC100838909 CHLRE_08g380151v5
Function* PHD finger protein EHD3 RING/FYVE/PHD-type zinc finger family protein PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3-like PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 uncharacterized LOC102599910 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3-like PHD finger protein EHD3 RING/FYVE/PHD-type zinc finger family protein uncharacterized LOC100281389 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3-like PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 5
tae04075 Plant hormone signal transduction 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 3
hvu00061 Fatty acid biosynthesis 2
hvu01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102629159 844061 103832177 103830573 107960383 107960385 107915204 111213906 111213062 106353486 100810450 100795906 100786712 100247132 7460982 7466438 25489715 101244658 102599910 107810514 107768750 4344443 103650916 100383733 100281389 123147651 123156210 123165669 123409698 8063143 8068510 100838909 5719876
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