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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107960385   PHD finger protein EHD3 
 ath-u.5   AT1G77250   RING/FYVE/PHD-type zinc finger family protein 
 gma-u.5   100810450   PHD finger protein EHD3 
 gma-u.5   100795906   PHD finger protein EHD3 
 vvi-u.5   100247132   PHD finger protein EHD3 
 ppo-u.5   7460982   PHD finger protein EHD3 
 ppo-u.5   7466438   PHD finger protein EHD3 
 mtr-u.5   25489715   PHD finger protein EHD3 
 sly-u.5   101244658   PHD finger protein EHD3 
 osa-u.5   4344443   PHD finger protein EHD3-like 
 zma-u.5   103650916   PHD finger protein EHD3 
 zma-u.5   100281389   uncharacterized LOC100281389 
 zma-u.5   100383733   RING/FYVE/PHD-type zinc finger family protein 

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Top 50 coexpressed genes to 107960385 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107960385 (ghi-r.1 coexpression data)

CoexMap"107960385"


ghiLOC107960385 | Entrez gene ID : 107960385    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 2 1 2 1 1 1 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016752211.1 [sequence] [blastp]
XP_040970024.1 [sequence] [blastp]
XP_040970025.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016752211.1)
nucl 9  (predict for XP_040970024.1)
nucl 9  (predict for XP_040970025.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016752211.1)
other 9  (predict for XP_040970024.1)
other 9  (predict for XP_040970025.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107960385
ath-u.5
for
AT1G77250
gma-u.5
for
100810450
gma-u.5
for
100795906
vvi-u.5
for
100247132
ppo-u.5
for
7460982
ppo-u.5
for
7466438
mtr-u.5
for
25489715
sly-u.5
for
101244658
osa-u.5
for
4344443
zma-u.5
for
103650916
zma-u.5
for
100281389
zma-u.5
for
100383733


Ortholog ID: 5433
Species ghi ghi ath bra bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae hvu sbi sbi bdi cre
Symbol LOC107960383 LOC107960385 AT1G77250 LOC103830573 LOC103832177 LOC111213062 LOC106353486 LOC102629159 LOC100795906 LOC100786712 LOC100247132 LOC7460982 LOC7466438 LOC25489715 LOC101244658 LOC102599910 LOC107768750 LOC107810514 LOC4344443 LOC100281389 LOC103650916 LOC123147651 LOC123165669 LOC123409698 LOC8068510 LOC8063143 LOC100838909 CHLRE_08g380151v5
Function* PHD finger protein EHD3 PHD finger protein EHD3 RING/FYVE/PHD-type zinc finger family protein PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3-like PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 uncharacterized LOC102599910 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3-like uncharacterized LOC100281389 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3-like PHD finger protein EHD3 PHD finger protein EHD3 PHD finger protein EHD3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 5
tae04075 Plant hormone signal transduction 2
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 3
hvu00061 Fatty acid biosynthesis 2
hvu01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107960383 107960385 844061 103830573 103832177 111213062 106353486 102629159 100795906 100786712 100247132 7460982 7466438 25489715 101244658 102599910 107768750 107810514 4344443 100281389 103650916 123147651 123165669 123409698 8068510 8063143 100838909 5719876
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