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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102630869   putative pentatricopeptide repeat-containing protein At1g68930 
 ath-u.5   AT1G68930   pentatricopeptide (PPR) repeat-containing protein 
 bra-r.6   103831305   putative pentatricopeptide repeat-containing protein At1g68930 
 ghi-r.1   107920191   putative pentatricopeptide repeat-containing protein At1g68930 
 gma-u.5   100807213   putative pentatricopeptide repeat-containing protein At1g68930 
 ppo-u.5   7489396   putative pentatricopeptide repeat-containing protein At1g68930 
 mtr-u.5   25501453   putative pentatricopeptide repeat-containing protein At1g68930 
 mtr-u.5   11423689   putative pentatricopeptide repeat-containing protein At1g68930 
 sot-r.1   102606208   putative pentatricopeptide repeat-containing protein At1g68930 
 nta-r.1   107784818   putative pentatricopeptide repeat-containing protein At1g68930 
 nta-r.1   107785596   putative pentatricopeptide repeat-containing protein At1g68930 
 osa-u.5   4328019   putative pentatricopeptide repeat-containing protein At1g68930 
 zma-u.5   100502275   uncharacterized LOC100502275 
 tae-r.2   123135457   putative pentatricopeptide repeat-containing protein At1g68930 
 tae-r.2   123131666   putative pentatricopeptide repeat-containing protein At1g68930 
 hvu-r.1   123403333   putative pentatricopeptide repeat-containing protein At1g68930 
 hvu-r.1   123404613   putative pentatricopeptide repeat-containing protein At1g68930 
 bdi-r.1   100828096   putative pentatricopeptide repeat-containing protein At1g68930 

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Top 50 coexpressed genes to 102630869 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102630869 (cit-r.1 coexpression data)

CoexMap"102630869"


citLOC102630869 | Entrez gene ID : 102630869    
Species cit ath bra ghi gma ppo mtr sot nta osa zma tae hvu bdi vvi sly sbi cre bna
Paralog 1 1 1 1 1 1 2 1 2 1 1 2 2 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (369 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (771 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1117 genes)  IEA  
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_006484277.1 [sequence] [blastp]
XP_052295963.1 [sequence] [blastp]
XP_052295964.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  cyto 1,  cysk_nucl 1  (predict for XP_006484277.1)
chlo 4,  nucl 2,  cyto 1,  extr 1  (predict for XP_052295963.1)
chlo 4,  nucl 2,  cyto 1,  extr 1  (predict for XP_052295964.1)
Subcellular
localization
TargetP
other 6  (predict for XP_006484277.1)
other 6  (predict for XP_052295963.1)
other 6  (predict for XP_052295964.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102630869
ath-u.5
for
AT1G68930
bra-r.6
for
103831305
ghi-r.1
for
107920191
gma-u.5
for
100807213
ppo-u.5
for
7489396
mtr-u.5
for
25501453
mtr-u.5
for
11423689
sot-r.1
for
102606208
nta-r.1
for
107784818
nta-r.1
for
107785596
osa-u.5
for
4328019
zma-u.5
for
100502275
tae-r.2
for
123135457
tae-r.2
for
123131666
hvu-r.1
for
123403333
hvu-r.1
for
123404613
bdi-r.1
for
100828096


Ortholog ID: 11515
Species cit ath bra ghi gma ppo mtr mtr sot nta nta osa zma tae tae hvu hvu bdi
Symbol LOC102630869 AT1G68930 LOC103831305 LOC107920191 LOC100807213 LOC7489396 LOC25501453 LOC11423689 LOC102606208 LOC107784818 LOC107785596 LOC4328019 LOC100502275 LOC123135457 LOC123131666 LOC123403333 LOC123404613 LOC100828096
Function* putative pentatricopeptide repeat-containing protein At1g68930 pentatricopeptide (PPR) repeat-containing protein putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 uncharacterized LOC100502275 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi04120 Ubiquitin mediated proteolysis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102630869 843226 103831305 107920191 100807213 7489396 25501453 11423689 102606208 107784818 107785596 4328019 100502275 123135457 123131666 123403333 123404613 100828096
The preparation time of this page was 1.4 [sec].