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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1  123404613  putative pentatricopeptide repeat-containing protein At1g68930 
 osa-u.5  4328019  putative pentatricopeptide repeat-containing protein At1g68930 
 zma-u.5  100502275  uncharacterized LOC100502275 
 ath-u.5  AT1G68930  pentatricopeptide (PPR) repeat-containing protein 
 gma-u.5  100807213  putative pentatricopeptide repeat-containing protein At1g68930 
 ppo-u.5  7489396  putative pentatricopeptide repeat-containing protein At1g68930 
 mtr-u.5  25501453  putative pentatricopeptide repeat-containing protein At1g68930 
 mtr-u.5  11423689  putative pentatricopeptide repeat-containing protein At1g68930 

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Top 50 coexpressed genes to 123404613 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123404613 (hvu-r.1 coexpression data)

CoexMap"123404613"


hvuLOC123404613 | Entrez gene ID : 123404613
Species hvu osa zma ath gma ppo mtr bdi bra vvi cit bna sbi sly ghi sot nta cre tae
Paralog 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (393 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (708 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1359 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044954490.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_044954490.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_044954490.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

hvu-r.1
for
123404613


osa-u.5
for
4328019


zma-u.5
for
100502275


ath-u.5
for
AT1G68930


gma-u.5
for
100807213


ppo-u.5
for
7489396


mtr-u.5
for
25501453


mtr-u.5
for
11423689



Ortholog ID: 11515
Species hvu hvu tae tae bdi osa zma ath gma bra ppo mtr mtr ghi sot cit nta nta
Symbol LOC123404613 LOC123403333 LOC123131666 LOC123135457 LOC100828096 LOC4328019 LOC100502275 AT1G68930 LOC100807213 LOC103831305 LOC7489396 LOC25501453 LOC11423689 LOC107920191 LOC102606208 LOC102630869 LOC107784818 LOC107785596
Function* putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 uncharacterized LOC100502275 pentatricopeptide (PPR) repeat-containing protein putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123404613 123403333 123131666 123135457 100828096 4328019 100502275 843226 100807213 103831305 7489396 25501453 11423689 107920191 102606208 102630869 107784818 107785596
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