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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7489396   putative pentatricopeptide repeat-containing protein At1g68930 
 ppo-r.4   7489396   putative pentatricopeptide repeat-containing protein At1g68930 
 ppo-m.4   7489396   putative pentatricopeptide repeat-containing protein At1g68930 
 gma-u.5   100807213   putative pentatricopeptide repeat-containing protein At1g68930 
 mtr-u.5   25501453   putative pentatricopeptide repeat-containing protein At1g68930 
 mtr-u.5   11423689   putative pentatricopeptide repeat-containing protein At1g68930 
 ath-u.5   AT1G68930   pentatricopeptide (PPR) repeat-containing protein 
 osa-u.5   4328019   putative pentatricopeptide repeat-containing protein At1g68930 
 zma-u.5   100502275   uncharacterized LOC100502275 

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Top 50 coexpressed genes to 7489396 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7489396 (ppo-u.5 coexpression data)

CoexMap"7489396"


ppoLOC7489396 | Entrez gene ID : 7489396    
Species ppo gma mtr ath osa zma sly sbi nta bra cre vvi cit hvu bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024465895.1 [sequence] [blastp]
XP_024465896.1 [sequence] [blastp]
XP_024465899.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  vacu 1  (predict for XP_024465895.1)
chlo 9,  vacu 1  (predict for XP_024465896.1)
chlo 9,  vacu 1  (predict for XP_024465899.1)
Subcellular
localization
TargetP
other 3  (predict for XP_024465895.1)
other 3  (predict for XP_024465896.1)
other 3  (predict for XP_024465899.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7489396

.
ppo-r.4
for
7489396

.
ppo-m.4
for
7489396

.
gma-u.5
for
100807213

.
mtr-u.5
for
25501453

.
mtr-u.5
for
11423689

.
ath-u.5
for
AT1G68930

.
osa-u.5
for
4328019

.
zma-u.5
for
100502275

.


Ortholog ID: 11515
Species ath gma osa zma bra ppo mtr mtr tae tae hvu hvu ghi sot cit bdi nta nta
Symbol AT1G68930 LOC100807213 LOC4328019 LOC100502275 LOC103831305 LOC7489396 LOC25501453 LOC11423689 LOC123131666 LOC123135457 LOC123404613 LOC123403333 LOC107920191 LOC102606208 LOC102630869 LOC100828096 LOC107784818 LOC107785596
Function* pentatricopeptide (PPR) repeat-containing protein putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 uncharacterized LOC100502275 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930 putative pentatricopeptide repeat-containing protein At1g68930
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi04120 Ubiquitin mediated proteolysis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843226 100807213 4328019 100502275 103831305 7489396 25501453 11423689 123131666 123135457 123404613 123403333 107920191 102606208 102630869 100828096 107784818 107785596
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