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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102631325   pentatricopeptide repeat-containing protein At5g13770, chloroplastic-like 
 ath-u.5   AT5G13770   Pentatricopeptide repeat (PPR-like) superfamily protein 
 gma-u.5   100819668   pentatricopeptide repeat-containing protein At5g13770, chloroplastic 
 gma-u.5   100783386   pentatricopeptide repeat-containing protein At5g13770, chloroplastic 
 vvi-u.5   100261964   pentatricopeptide repeat-containing protein At5g13770, chloroplastic 
 vvi-u.5   100256233   pentatricopeptide repeat-containing protein At5g13770, chloroplastic 
 ppo-u.5   18109218   pentatricopeptide repeat-containing protein At5g13770, chloroplastic 
 ppo-u.5   7459078   pentatricopeptide repeat-containing protein At5g13770, chloroplastic 
 mtr-u.5   25482643   pentatricopeptide repeat-containing protein At5g13770, chloroplastic 
 sly-u.5   101254893   pentatricopeptide repeat-containing protein At5g13770, chloroplastic 
 osa-u.5   9271390   pentatricopeptide repeat-containing protein At5g13770, chloroplastic 
 zma-u.5   100274460   uncharacterized LOC100274460 

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Top 50 coexpressed genes to 102631325 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102631325 (cit-r.1 coexpression data)

CoexMap"102631325"


citLOC102631325 | Entrez gene ID : 102631325    
Species cit ath gma vvi ppo mtr sly osa zma bdi hvu bra bna sbi ghi sot nta cre tae
Paralog 1 1 2 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3939 genes)  IEA  
Protein XP_052288697.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 1,  nucl 1,  mito 1,  plas 1,  E.R. 1,  cysk 1,  cysk_plas 1,  E.R._plas 1,  mito_plas 1  (predict for XP_052288697.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for XP_052288697.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102631325
ath-u.5
for
AT5G13770
gma-u.5
for
100819668
gma-u.5
for
100783386
vvi-u.5
for
100261964
vvi-u.5
for
100256233
ppo-u.5
for
18109218
ppo-u.5
for
7459078
mtr-u.5
for
25482643
sly-u.5
for
101254893
osa-u.5
for
9271390
zma-u.5
for
100274460


Ortholog ID: 9657
Species cit cit ath bra ghi ghi bna gma gma vvi vvi ppo ppo mtr sly sot nta osa zma tae tae hvu sbi bdi
Symbol LOC102631325 LOC102614221 AT5G13770 LOC103850898 LOC121206158 LOC107889310 LOC106384430 LOC100783386 LOC100819668 LOC100261964 LOC100256233 LOC7459078 LOC18109218 LOC25482643 LOC101254893 LOC107062002 LOC107786939 LOC9271390 LOC100274460 LOC123054094 LOC123046221 LOC123430614 LOC110436337 LOC100840486
Function* pentatricopeptide repeat-containing protein At5g13770, chloroplastic-like pentatricopeptide repeat-containing protein At5g13770, chloroplastic-like Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic uncharacterized LOC107786939 pentatricopeptide repeat-containing protein At5g13770, chloroplastic uncharacterized LOC100274460 pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic pentatricopeptide repeat-containing protein At5g13770, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 9
cit00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 3
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna04517 IgSF CAM signaling 2
bna04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 4
gma00760 Nicotinate and nicotinamide metabolism 2
gma00195 Photosynthesis 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00196 Photosynthesis - antenna proteins 6
ppo00195 Photosynthesis 5
ppo00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00195 Photosynthesis 10
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 4
sly00196 Photosynthesis - antenna proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 4
sot00196 Photosynthesis - antenna proteins 3
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102631325 102614221 831222 103850898 121206158 107889310 106384430 100783386 100819668 100261964 100256233 7459078 18109218 25482643 101254893 107062002 107786939 9271390 100274460 123054094 123046221 123430614 110436337 100840486
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