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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   102667548   pentatricopeptide repeat-containing protein At5g16640, mitochondrial 
 gma-r.7   102667548   pentatricopeptide repeat-containing protein At5g16640, mitochondrial 
 mtr-u.5   11435843   pentatricopeptide repeat-containing protein At1g62680, mitochondrial 
 ppo-u.5   7482593   putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial 
 vvi-u.5   104880010   pentatricopeptide repeat-containing protein At1g09900 
 ghi-r.1   107960783   pentatricopeptide repeat-containing protein At5g64320, mitochondrial 
 ghi-r.1   107935938   pentatricopeptide repeat-containing protein At5g41170, mitochondrial 
 cit-r.1   102627765   pentatricopeptide repeat-containing protein At1g09900-like 
 sly-u.5   101257699   pentatricopeptide repeat-containing protein At1g62680, mitochondrial-like 
 sot-r.1   107060436   pentatricopeptide repeat-containing protein At5g41170, mitochondrial-like 
 osa-u.5   4332759   pentatricopeptide repeat-containing protein At1g09900 
 zma-u.5   100191659   PPR containing plant-like protein 
 tae-r.2   123097542   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 tae-r.2   123092208   putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial 
 tae-r.2   123085797   pentatricopeptide repeat-containing protein At1g64580 
 hvu-r.1   123446505   putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial 
 sbi-r.1   8083663   putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial 
 bdi-r.1   100825443   pentatricopeptide repeat-containing protein At1g12775, mitochondrial 

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Top 50 coexpressed genes to 102667548 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102667548 (gma-u.5 coexpression data)

CoexMap"102667548"


gmaLOC102667548 | Entrez gene ID : 102667548      
Species gma mtr ppo vvi ghi cit sly sot osa zma tae hvu sbi bdi nta bra ath cre bna
Paralog 2 1 1 1 2 1 1 1 1 1 3 1 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006587922.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for XP_006587922.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for XP_006587922.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
102667548
gma-r.7
for
102667548
mtr-u.5
for
11435843
ppo-u.5
for
7482593
vvi-u.5
for
104880010
ghi-r.1
for
107960783
ghi-r.1
for
107935938
cit-r.1
for
102627765
sly-u.5
for
101257699
sot-r.1
for
107060436
osa-u.5
for
4332759
zma-u.5
for
100191659
tae-r.2
for
123097542
tae-r.2
for
123092208
tae-r.2
for
123085797
hvu-r.1
for
123446505
sbi-r.1
for
8083663
bdi-r.1
for
100825443


Ortholog ID: 12988
Species gma mtr ppo vvi ghi ghi cit sly sot osa zma tae tae tae hvu sbi bdi
Symbol LOC102667548 LOC11435843 LOC7482593 LOC104880010 LOC107960783 LOC107935938 LOC102627765 LOC101257699 LOC107060436 LOC4332759 LOC100191659 LOC123097542 LOC123092208 LOC123085797 LOC123446505 LOC8083663 LOC100825443
Function* pentatricopeptide repeat-containing protein At5g16640, mitochondrial pentatricopeptide repeat-containing protein At1g62680, mitochondrial putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At5g64320, mitochondrial pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At1g09900-like pentatricopeptide repeat-containing protein At1g62680, mitochondrial-like pentatricopeptide repeat-containing protein At5g41170, mitochondrial-like pentatricopeptide repeat-containing protein At1g09900 PPR containing plant-like protein pentatricopeptide repeat-containing protein At3g53700, chloroplastic putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial pentatricopeptide repeat-containing protein At1g64580 putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial pentatricopeptide repeat-containing protein At1g12775, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 2
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi00195 Photosynthesis 2
sbi00196 Photosynthesis - antenna proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102667548 11435843 7482593 104880010 107960783 107935938 102627765 101257699 107060436 4332759 100191659 123097542 123092208 123085797 123446505 8083663 100825443
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