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Orthologous genes in OrthoFinder**

Species Gene Description
 vvi-u.5   104880010   pentatricopeptide repeat-containing protein At1g09900 
 vvi-r.5   104880010   pentatricopeptide repeat-containing protein At1g09900 
 gma-u.5   102667548   pentatricopeptide repeat-containing protein At5g16640, mitochondrial 
 ppo-u.5   7482593   putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial 
 mtr-u.5   11435843   pentatricopeptide repeat-containing protein At1g62680, mitochondrial 
 sly-u.5   101257699   pentatricopeptide repeat-containing protein At1g62680, mitochondrial-like 
 osa-u.5   4332759   pentatricopeptide repeat-containing protein At1g09900 
 zma-u.5   100191659   PPR containing plant-like protein 

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Top 50 coexpressed genes to 104880010 (vvi-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 104880010 (vvi-u.5 coexpression data)

CoexMap"104880010"


vviLOC104880010 | Entrez gene ID : 104880010    
Species vvi gma ppo mtr sly osa zma hvu bna cit bra ghi sbi bdi ath nta tae cre sot
Paralog 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4232 genes)  IEA  
Protein XP_010653334.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  E.R. 1,  nucl 1,  cyto 1,  cyto_nucl 1,  cyto_mito 1,  E.R._vacu 1,  E.R._plas 1,  mito_plas 1  (predict for XP_010653334.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_010653334.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

vvi-u.5
for
104880010
vvi-r.5
for
104880010
gma-u.5
for
102667548
ppo-u.5
for
7482593
mtr-u.5
for
11435843
sly-u.5
for
101257699
osa-u.5
for
4332759
zma-u.5
for
100191659


Ortholog ID: 12988
Species vvi gma ppo mtr ghi ghi cit sly sot osa zma tae tae hvu sbi bdi
Symbol LOC104880010 LOC102667548 LOC7482593 LOC11435843 LOC107935938 LOC107960783 LOC102627765 LOC101257699 LOC107060436 LOC4332759 LOC100191659 LOC123097542 LOC123085797 LOC123446505 LOC8083663 LOC100825443
Function* pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At5g16640, mitochondrial putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial pentatricopeptide repeat-containing protein At1g62680, mitochondrial pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At5g64320, mitochondrial pentatricopeptide repeat-containing protein At1g09900-like pentatricopeptide repeat-containing protein At1g62680, mitochondrial-like pentatricopeptide repeat-containing protein At5g41170, mitochondrial-like pentatricopeptide repeat-containing protein At1g09900 PPR containing plant-like protein pentatricopeptide repeat-containing protein At3g53700, chloroplastic pentatricopeptide repeat-containing protein At1g64580 putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial pentatricopeptide repeat-containing protein At1g12775, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 2
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi00195 Photosynthesis 2
sbi00196 Photosynthesis - antenna proteins 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 104880010 102667548 7482593 11435843 107935938 107960783 102627765 101257699 107060436 4332759 100191659 123097542 123085797 123446505 8083663 100825443
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