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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123085797   pentatricopeptide repeat-containing protein At1g64580 
 tae-r.2   123092208   putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial 
 tae-r.2   123097542   pentatricopeptide repeat-containing protein At3g53700, chloroplastic 
 hvu-r.1   123446505   putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial 
 bdi-r.1   100825443   pentatricopeptide repeat-containing protein At1g12775, mitochondrial 
 osa-u.5   4332759   pentatricopeptide repeat-containing protein At1g09900 
 zma-u.5   100191659   PPR containing plant-like protein 
 sbi-r.1   8083663   putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial 
 gma-u.5   102667548   pentatricopeptide repeat-containing protein At5g16640, mitochondrial 
 sly-u.5   101257699   pentatricopeptide repeat-containing protein At1g62680, mitochondrial-like 
 vvi-u.5   104880010   pentatricopeptide repeat-containing protein At1g09900 
 ppo-u.5   7482593   putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial 
 mtr-u.5   11435843   pentatricopeptide repeat-containing protein At1g62680, mitochondrial 
 ghi-r.1   107935938   pentatricopeptide repeat-containing protein At5g41170, mitochondrial 
 ghi-r.1   107960783   pentatricopeptide repeat-containing protein At5g64320, mitochondrial 
 sot-r.1   107060436   pentatricopeptide repeat-containing protein At5g41170, mitochondrial-like 
 cit-r.1   102627765   pentatricopeptide repeat-containing protein At1g09900-like 

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Top 50 coexpressed genes to 123085797 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123085797 (tae-r.2 coexpression data)

CoexMap"123085797"


taeLOC123085797 | Entrez gene ID : 123085797    
Species tae hvu bdi osa zma sbi gma sly vvi ppo mtr ghi sot cit bra cre ath nta bna
Paralog 3 1 1 1 1 1 1 1 1 1 1 2 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044363442.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_044363442.1)
Subcellular
localization
TargetP
chlo 4  (predict for XP_044363442.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123085797
tae-r.2
for
123092208
tae-r.2
for
123097542
hvu-r.1
for
123446505
bdi-r.1
for
100825443
osa-u.5
for
4332759
zma-u.5
for
100191659
sbi-r.1
for
8083663
gma-u.5
for
102667548
sly-u.5
for
101257699
vvi-u.5
for
104880010
ppo-u.5
for
7482593
mtr-u.5
for
11435843
ghi-r.1
for
107935938
ghi-r.1
for
107960783
sot-r.1
for
107060436
cit-r.1
for
102627765


Ortholog ID: 12988
Species tae tae tae hvu bdi osa zma sbi gma sly vvi ppo mtr ghi ghi sot cit
Symbol LOC123085797 LOC123092208 LOC123097542 LOC123446505 LOC100825443 LOC4332759 LOC100191659 LOC8083663 LOC102667548 LOC101257699 LOC104880010 LOC7482593 LOC11435843 LOC107935938 LOC107960783 LOC107060436 LOC102627765
Function* pentatricopeptide repeat-containing protein At1g64580 putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial pentatricopeptide repeat-containing protein At3g53700, chloroplastic putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial pentatricopeptide repeat-containing protein At1g12775, mitochondrial pentatricopeptide repeat-containing protein At1g09900 PPR containing plant-like protein putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial pentatricopeptide repeat-containing protein At5g16640, mitochondrial pentatricopeptide repeat-containing protein At1g62680, mitochondrial-like pentatricopeptide repeat-containing protein At1g09900 putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial pentatricopeptide repeat-containing protein At1g62680, mitochondrial pentatricopeptide repeat-containing protein At5g41170, mitochondrial pentatricopeptide repeat-containing protein At5g64320, mitochondrial pentatricopeptide repeat-containing protein At5g41170, mitochondrial-like pentatricopeptide repeat-containing protein At1g09900-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 2
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
sbi00195 Photosynthesis 2
sbi00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
cit03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123085797 123092208 123097542 123446505 100825443 4332759 100191659 8083663 102667548 101257699 104880010 7482593 11435843 107935938 107960783 107060436 102627765
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