ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	103651042	TBC1 domain family member 8B
zma-r.6	103651042	TBC1 domain family member 8B
zma-m.5	103651042	TBC1 domain family member 8B
zma-u.5	103630445	TBC1 domain family member 10B
zma-u.5	100284494	rhodopsin-like receptor
zma-u.5	103634483	ecotropic viral integration site 5 protein homolog
sbi-r.1	8057759	TBC1 domain family member 8B
sbi-r.1	8081453	rab GTPase-activating protein 1
sbi-r.1	8072559	TBC1 domain family member 10B
osa-u.5	4332461	uncharacterized LOC4332461
osa-u.5	4339042	uncharacterized LOC4339042
tae-r.2	123059492	ecotropic viral integration site 5 protein homolog
tae-r.2	123071321	TBC1 domain family member 8B
tae-r.2	123062509	TBC1 domain family member 8B
hvu-r.1	123444965	TBC1 domain family member 8B
hvu-r.1	123445163	ecotropic viral integration site 5 protein homolog
hvu-r.1	123448958	TBC domain-containing protein C215.01
bdi-r.1	100831523	TBC1 domain family member 8B
bdi-r.1	100832139	uncharacterized LOC100832139
bdi-r.1	100840960	TBC1 domain family member 2A
ath-u.5	AT2G37290	Ypt/Rab-GAP domain of gyp1p superfamily protein
ath-u.5	AT2G39280	Ypt/Rab-GAP domain of gyp1p superfamily protein
ath-u.5	AT3G55020	Ypt/Rab-GAP domain of gyp1p superfamily protein
gma-u.5	100809869	TBC1 domain family member 10B
gma-u.5	100805928	TBC1 domain family member 8B
gma-u.5	100775232	ecotropic viral integration site 5 ortholog
sly-u.5	101256081	uncharacterized LOC101256081
sly-u.5	101262244	uncharacterized LOC101262244
bra-r.6	103867210	ecotropic viral integration site 5 protein homolog
bra-r.6	103841417	rab GTPase-activating protein 1
vvi-u.5	100255322	uncharacterized LOC100255322
ppo-u.5	7457898	uncharacterized LOC7457898
ppo-u.5	7458625	uncharacterized LOC7458625
ppo-u.5	18100252	uncharacterized LOC18100252
mtr-u.5	25484063	ecotropic viral integration site 5 protein homolog
mtr-u.5	11446021	TBC1 domain family member 8B
ghi-r.1	107918545	ecotropic viral integration site 5 protein homolog
ghi-r.1	107930727	TBC1 domain family member 8B
bna-r.1	106434001	rab GTPase-activating protein 1
bna-r.1	106447700	TBC1 domain family member 10B
bna-r.1	106398660	EVI5-like protein
sot-r.1	102578585	rab GTPase-activating protein 1-like
sot-r.1	102579749	TBC1 domain family member 8B-like
sot-r.1	102584220	EVI5-like protein
cit-r.1	102606977	uncharacterized LOC102606977
cit-r.1	102614554	uncharacterized LOC102614554
nta-r.1	107761523	uncharacterized LOC107761523
nta-r.1	107762424	uncharacterized LOC107762424
nta-r.1	107763452	uncharacterized LOC107763452
cre-r.1	CHLRE_02g077700v5	uncharacterized protein

Top 50 coexpressed genes to 103651042 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 103651042 (zma-u.5 coexpression data)

CoexMap"103651042"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0043087 [list] [network] regulation of GTPase activity

(37 genes)

IEA

GO CC

GO MF

GO:0031267 [list] [network] small GTPase binding	(39 genes)	IEA
GO:0005096 [list] [network] GTPase activator activity	(92 genes)	IEA

Protein

XP_008674857.1 [sequence] [blastp]
XP_008674858.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, nucl 3, chlo 1, mito 1, chlo_mito 1, nucl_plas 1	(predict for XP_008674857.1)
cyto 4, nucl 3, chlo 1, mito 1, chlo_mito 1, nucl_plas 1	(predict for XP_008674858.1)

Subcellular
localization
TargetP

mito 6, other 3	(predict for XP_008674857.1)
mito 6, other 3	(predict for XP_008674858.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 103651042	zma-r.6 for 103651042	zma-m.5 for 103651042	zma-u.5 for 103630445	zma-u.5 for 100284494	zma-u.5 for 103634483	sbi-r.1 for 8057759	sbi-r.1 for 8081453	sbi-r.1 for 8072559	osa-u.5 for 4332461	osa-u.5 for 4339042	tae-r.2 for 123059492	tae-r.2 for 123071321	tae-r.2 for 123062509	hvu-r.1 for 123444965	hvu-r.1 for 123445163	hvu-r.1 for 123448958	bdi-r.1 for 100831523	bdi-r.1 for 100832139	bdi-r.1 for 100840960	ath-u.5 for AT2G37290	ath-u.5 for AT2G39280	ath-u.5 for AT3G55020	gma-u.5 for 100809869	gma-u.5 for 100805928	gma-u.5 for 100775232	sly-u.5 for 101256081	sly-u.5 for 101262244	bra-r.6 for 103867210	bra-r.6 for 103841417	vvi-u.5 for 100255322	ppo-u.5 for 7457898	ppo-u.5 for 7458625	ppo-u.5 for 18100252	mtr-u.5 for 25484063	mtr-u.5 for 11446021	ghi-r.1 for 107918545	ghi-r.1 for 107930727	bna-r.1 for 106434001	bna-r.1 for 106447700	bna-r.1 for 106398660	sot-r.1 for 102578585	sot-r.1 for 102579749	sot-r.1 for 102584220	cit-r.1 for 102606977	cit-r.1 for 102614554	nta-r.1 for 107761523	nta-r.1 for 107762424	nta-r.1 for 107763452	cre-r.1 for CHLRE_02g077700v5

Ortholog

Ortholog ID: 1699

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

rhodopsin-like receptor

ecotropic viral integration site 5 protein homolog

uncharacterized LOC100278125

TBC1 domain family member 8B

rab GTPase-activating protein 1

TBC1 domain family member 10B

uncharacterized LOC4332461

uncharacterized LOC4339042

ecotropic viral integration site 5 protein homolog

TBC1 domain family member 8B

ecotropic viral integration site 5 protein homolog

TBC1 domain family member 8B

ecotropic viral integration site 5 protein homolog

TBC domain-containing protein C215.01

TBC1 domain family member 8B

uncharacterized LOC100832139

TBC1 domain family member 2A

Ypt/Rab-GAP domain of gyp1p superfamily protein

TBC1 domain family member 10B

TBC1 domain family member 8B

ecotropic viral integration site 5 ortholog

uncharacterized LOC101256081

uncharacterized LOC101262244

ecotropic viral integration site 5 protein homolog

rab GTPase-activating protein 1

uncharacterized LOC100255322

uncharacterized LOC7457898

uncharacterized LOC7458625

uncharacterized LOC18100252

ecotropic viral integration site 5 protein homolog

TBC1 domain family member 8B

EVI5-like protein

TBC1 domain family member 10B

EVI5-like protein

ecotropic viral integration site 5 protein homolog

rab GTPase-activating protein 1-like

TBC1 domain family member 8B-like

EVI5-like protein

uncharacterized LOC102606977

uncharacterized LOC102614554

uncharacterized LOC107761523

uncharacterized LOC107778454

uncharacterized LOC107780032

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04142	Lysosome	3
sbi04144	Endocytosis	3
sbi04141	Protein processing in endoplasmic reticulum	2
sbi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	4
sbi04142	Lysosome	2
sbi05100	Bacterial invasion of epithelial cells	2
sbi00100	Steroid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04142	Lysosome	2
tae04144	Endocytosis	2
tae05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04144	Endocytosis	4
tae00564	Glycerophospholipid metabolism	3
tae00051	Fructose and mannose metabolism	2
tae00520	Amino sugar and nucleotide sugar metabolism	2
tae00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	3
tae00565	Ether lipid metabolism	3
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2
hvu04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04142	Lysosome	2
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	3
bdi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00600	Sphingolipid metabolism	2
gma00190	Oxidative phosphorylation	2
gma04145	Phagosome	2
gma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2
gma04144	Endocytosis	2
gma05100	Bacterial invasion of epithelial cells	2
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00511	Other glycan degradation	3
vvi04814	Motor proteins	2
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2
ppo03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2
cit04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

100284494

103634483

100278125

8057759

8081453

8072559

4332461

4339042

123059492

123071321

123092512

123444965

123445163

123448958

100831523

100832139

100840960

818306

818513

824668

100809869

100805928

100775232

101256081

101262244

103867210

103841417

100255322

7457898

7458625

18100252

25484063

11446021

107957338

106447700

106398660

106396356

102578585

102579749

102584220

102606977

102614554

107761523

107778454

107780032

5727237

The preparation time of this page was 0.2 [sec].


Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	6	3	2	3	3	3	3	3	2	2	1	3	2	2	3	3	2	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 103651042 (zma-u.5 coexpression data)

Top 50 enrichment test to 103651042 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**