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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103652517   uncharacterized LOC103652517 
 zma-r.6   103652517   uncharacterized LOC103652517 
 zma-u.5   103649658   small subunit processome component 20 homolog 
 sbi-r.1   8078224   small subunit processome component 20 homolog 
 osa-u.5   107279412   uncharacterized LOC107279412 
 tae-r.2   123069997   U3 small nucleolar RNA-associated protein 20 
 tae-r.2   123078466   small subunit processome component 20 homolog 
 tae-r.2   123061359   small subunit processome component 20 homolog 
 hvu-r.1   123443772   small subunit processome component 20 homolog 
 bdi-r.1   100825719   small subunit processome component 20 homolog 
 ath-u.5   AT4G30990   ARM repeat superfamily protein 
 gma-u.5   100811612   small subunit processome component 20 homolog 
 sly-u.5   101248519   uncharacterized LOC101248519 
 bra-r.6   103862024   U3 small nucleolar RNA-associated protein 20 
 bra-r.6   103840668   small subunit processome component 20 homolog 
 vvi-u.5   100255444   uncharacterized LOC100255444 
 ppo-u.5   18095239   U3 small nucleolar RNA-associated protein 20 
 mtr-u.5   11443043   small subunit processome component 20 homolog 
 ghi-r.1   107914742   small subunit processome component 20 homolog 
 ghi-r.1   107915526   small subunit processome component 20 homolog 
 bna-r.1   106452786   U3 small nucleolar RNA-associated protein 20-like 
 bna-r.1   106410570   U3 small nucleolar RNA-associated protein 20 
 sot-r.1   102606367   uncharacterized LOC102606367 
 sot-r.1   102593142   uncharacterized LOC102593142 
 cit-r.1   102625218   uncharacterized LOC102625218 
 nta-r.1   107826465   uncharacterized LOC107826465 
 nta-r.1   142168673   uncharacterized LOC142168673 
 cre-r.1   CHLRE_10g461000v5   uncharacterized protein 

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Top 50 coexpressed genes to 103652517 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103652517 (zma-u.5 coexpression data)

CoexMap"103652517"


zmaLOC103652517 | Entrez gene ID : 103652517    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 1 1 1 1 1 2 1 1 1 2 2 2 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0030686 [list] [network] 90S preribosome  (40 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (54 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (246 genes)  IEA  
GO MF
Protein XP_020406621.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  cyto_mito 1,  nucl 1  (predict for XP_020406621.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_020406621.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103652517
zma-r.6
for
103652517
zma-u.5
for
103649658
sbi-r.1
for
8078224
osa-u.5
for
107279412
tae-r.2
for
123069997
tae-r.2
for
123078466
tae-r.2
for
123061359
hvu-r.1
for
123443772
bdi-r.1
for
100825719
ath-u.5
for
AT4G30990
gma-u.5
for
100811612
sly-u.5
for
101248519
bra-r.6
for
103862024
bra-r.6
for
103840668
vvi-u.5
for
100255444
ppo-u.5
for
18095239
mtr-u.5
for
11443043
ghi-r.1
for
107914742
ghi-r.1
for
107915526
bna-r.1
for
106452786
bna-r.1
for
106410570
sot-r.1
for
102606367
sot-r.1
for
102593142
cit-r.1
for
102625218
nta-r.1
for
107826465
nta-r.1
for
142168673
cre-r.1
for
CHLRE_10g461000v5


Ortholog ID: 7300
Species zma zma sbi osa tae tae tae hvu bdi ath gma sly bra bra vvi ppo mtr ghi ghi bna bna sot sot cit nta nta cre
Symbol LOC103652517 LOC103649658 LOC8078224 LOC107279412 LOC123069997 LOC123078466 LOC123061359 LOC123443772 LOC100825719 AT4G30990 LOC100811612 LOC101248519 LOC103862024 LOC103840668 LOC100255444 LOC18095239 LOC11443043 LOC107914742 LOC107915526 LOC106452786 LOC106410570 LOC102606367 LOC102593142 LOC102625218 LOC107826465 LOC142168673 CHLRE_10g461000v5
Function* uncharacterized LOC103652517 small subunit processome component 20 homolog small subunit processome component 20 homolog uncharacterized LOC107279412 U3 small nucleolar RNA-associated protein 20 small subunit processome component 20 homolog small subunit processome component 20 homolog small subunit processome component 20 homolog small subunit processome component 20 homolog ARM repeat superfamily protein small subunit processome component 20 homolog uncharacterized LOC101248519 U3 small nucleolar RNA-associated protein 20 small subunit processome component 20 homolog uncharacterized LOC100255444 U3 small nucleolar RNA-associated protein 20 small subunit processome component 20 homolog small subunit processome component 20 homolog small subunit processome component 20 homolog U3 small nucleolar RNA-associated protein 20-like U3 small nucleolar RNA-associated protein 20 uncharacterized LOC102606367 uncharacterized LOC102593142 uncharacterized LOC102625218 uncharacterized LOC107826465 uncharacterized LOC142168673 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03020 RNA polymerase 4
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03030 DNA replication 3
nta03410 Base excision repair 3
nta03420 Nucleotide excision repair 3
nta03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta03013 Nucleocytoplasmic transport 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103652517 103649658 8078224 107279412 123069997 123078466 123061359 123443772 100825719 829224 100811612 101248519 103862024 103840668 100255444 18095239 11443043 107914742 107915526 106452786 106410570 102606367 102593142 102625218 107826465 142168673 5724153
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