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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106452786   U3 small nucleolar RNA-associated protein 20-like 
 ath-u.5   AT4G30990   ARM repeat superfamily protein 
 gma-u.5   100811612   small subunit processome component 20 homolog 
 vvi-u.5   100255444   uncharacterized LOC100255444 
 ppo-u.5   18095239   U3 small nucleolar RNA-associated protein 20 
 mtr-u.5   11443043   small subunit processome component 20 homolog 
 sly-u.5   101248519   uncharacterized LOC101248519 
 osa-u.5   107279412   uncharacterized LOC107279412 
 zma-u.5   103652517   uncharacterized LOC103652517 
 zma-u.5   103649658   small subunit processome component 20 homolog 

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Top 50 coexpressed genes to 106452786 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106452786 (bna-r.1 coexpression data)

CoexMap"106452786"


bnaLOC106452786 | Entrez gene ID : 106452786    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0030686 [list] [network] 90S preribosome  (123 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (155 genes)  IEA  
GO:0005730 [list] [network] nucleolus  (615 genes)  IEA  
GO MF
Protein XP_013750413.2 [sequence] [blastp]
XP_048621492.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  cysk_nucl 3  (predict for XP_013750413.2)
nucl 5,  cyto 3,  cysk_nucl 3  (predict for XP_048621492.1)
Subcellular
localization
TargetP
other 6  (predict for XP_013750413.2)
other 6  (predict for XP_048621492.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106452786

.
ath-u.5
for
AT4G30990

.
gma-u.5
for
100811612

.
vvi-u.5
for
100255444

.
ppo-u.5
for
18095239

.
mtr-u.5
for
11443043

.
sly-u.5
for
101248519

.
osa-u.5
for
107279412

.
zma-u.5
for
103652517

.
zma-u.5
for
103649658

.


Ortholog ID: 7300
Species ath gma sly osa zma zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT4G30990 LOC100811612 LOC101248519 LOC107279412 LOC103649658 LOC103652517 LOC103862024 LOC103840668 LOC100255444 LOC18095239 LOC11443043 LOC123069997 LOC123078466 LOC123443772 LOC107915526 LOC107914742 LOC106452786 LOC106410570 CHLRE_10g461000v5 LOC8078224 LOC102606367 LOC102625218 LOC100825719 LOC107826465 LOC142168673
Function* ARM repeat superfamily protein small subunit processome component 20 homolog uncharacterized LOC101248519 uncharacterized LOC107279412 small subunit processome component 20 homolog uncharacterized LOC103652517 U3 small nucleolar RNA-associated protein 20 small subunit processome component 20 homolog uncharacterized LOC100255444 U3 small nucleolar RNA-associated protein 20 small subunit processome component 20 homolog U3 small nucleolar RNA-associated protein 20 small subunit processome component 20 homolog small subunit processome component 20 homolog small subunit processome component 20 homolog small subunit processome component 20 homolog U3 small nucleolar RNA-associated protein 20-like U3 small nucleolar RNA-associated protein 20 uncharacterized protein small subunit processome component 20 homolog uncharacterized LOC102606367 uncharacterized LOC102625218 small subunit processome component 20 homolog uncharacterized LOC107826465 uncharacterized LOC142168673
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 2
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03020 RNA polymerase 4
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03030 DNA replication 3
nta03410 Base excision repair 3
nta03420 Nucleotide excision repair 3
nta03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta03013 Nucleocytoplasmic transport 2
nta03250 Viral life cycle - HIV-1 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829224 100811612 101248519 107279412 103649658 103652517 103862024 103840668 100255444 18095239 11443043 123069997 123078466 123443772 107915526 107914742 106452786 106410570 5724153 8078224 102606367 102625218 100825719 107826465 142168673
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