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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103655706   DNA polymerase eta 
 zma-r.6   103655706   DNA polymerase eta 
 zma-u.5   103651191   DNA polymerase eta 
 sbi-r.1   8075604   DNA polymerase eta 
 osa-u.5   4325305   DNA polymerase eta 
 tae-r.2   123079219   DNA polymerase eta 
 tae-r.2   123070829   DNA polymerase eta 
 tae-r.2   123062100   DNA polymerase eta 
 hvu-r.1   123444447   DNA polymerase eta 
 bdi-r.1   100821109   DNA polymerase eta 
 ath-u.5   POLH   Y-family DNA polymerase H 
 gma-u.5   100780894   DNA polymerase eta 
 sly-u.5   101257297   DNA polymerase eta 
 bra-r.6   103827832   DNA polymerase eta 
 vvi-u.5   100266192   DNA polymerase eta 
 ppo-u.5   7465359   DNA polymerase eta 
 mtr-u.5   25493444   DNA polymerase eta 
 ghi-r.1   107960652   DNA polymerase eta 
 ghi-r.1   107915273   DNA polymerase eta 
 bna-r.1   106391119   DNA polymerase eta 
 bna-r.1   106386352   DNA polymerase eta-like 
 sot-r.1   102599189   DNA polymerase eta 
 cit-r.1   102631204   DNA polymerase eta 
 nta-r.1   107829874   DNA polymerase eta-like 
 nta-r.1   107795010   DNA polymerase eta 
 cre-r.1   CHLRE_12g524150v5   uncharacterized protein 

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Top 50 coexpressed genes to 103655706 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103655706 (zma-u.5 coexpression data)

CoexMap"103655706"


zmaLOC103655706 | Entrez gene ID : 103655706    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 3 1 1 1 1 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03460 [list] [network] Fanconi anemia pathway (52 genes)
GO BP
GO:0042276 [list] [network] error-prone translesion synthesis  (16 genes)  IEA  
GO:0009314 [list] [network] response to radiation  (117 genes)  IEA  
GO CC
GO:0035861 [list] [network] site of double-strand break  (21 genes)  IEA  
GO:0005657 [list] [network] replication fork  (61 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (39 genes)  IEA  
Protein XP_020408301.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  plas 2,  E.R. 2,  E.R._plas 2,  cyto 1,  E.R._vacu 1  (predict for XP_020408301.1)
Subcellular
localization
TargetP
other 9  (predict for XP_020408301.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103655706
zma-r.6
for
103655706
zma-u.5
for
103651191
sbi-r.1
for
8075604
osa-u.5
for
4325305
tae-r.2
for
123079219
tae-r.2
for
123070829
tae-r.2
for
123062100
hvu-r.1
for
123444447
bdi-r.1
for
100821109
ath-u.5
for
POLH
gma-u.5
for
100780894
sly-u.5
for
101257297
bra-r.6
for
103827832
vvi-u.5
for
100266192
ppo-u.5
for
7465359
mtr-u.5
for
25493444
ghi-r.1
for
107960652
ghi-r.1
for
107915273
bna-r.1
for
106391119
bna-r.1
for
106386352
sot-r.1
for
102599189
cit-r.1
for
102631204
nta-r.1
for
107829874
nta-r.1
for
107795010
cre-r.1
for
CHLRE_12g524150v5


Ortholog ID: 6671
Species zma sbi osa tae tae tae hvu bdi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC103655706 LOC8075604 LOC4325305 LOC123079219 LOC123070829 LOC123062100 LOC123444447 LOC100821109 POLH LOC100780894 LOC101257297 LOC103827832 LOC100266192 LOC7465359 LOC25493444 LOC107960652 LOC107915273 LOC106391119 LOC106386352 LOC102599189 LOC102631204 LOC107829874 LOC107795010 CHLRE_12g524150v5
Function* DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta Y-family DNA polymerase H DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta-like DNA polymerase eta DNA polymerase eta DNA polymerase eta-like DNA polymerase eta uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 4
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03460 Fanconi anemia pathway 3
ath03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03410 Base excision repair 3
gma03420 Nucleotide excision repair 3
gma03430 Mismatch repair 3
gma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
ghi01240 Biosynthesis of cofactors 4
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta03250 Viral life cycle - HIV-1 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103655706 8075604 4325305 123079219 123070829 123062100 123444447 100821109 834503 100780894 101257297 103827832 100266192 7465359 25493444 107960652 107915273 106391119 106386352 102599189 102631204 107829874 107795010 5722524
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