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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103830476   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 ath-u.5   FTSH12   FTSH protease 12 
 gma-u.5   100819005   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 vvi-u.5   100244978   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 ppo-u.5   18102652   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 mtr-u.5   11407282   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 
 sly-u.5   101256833   ATP-dependent zinc metalloprotease FTSH 12, chloroplastic 

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Top 50 coexpressed genes to 103830476 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103830476 (bra-r.6 coexpression data)

CoexMap"103830476"


braLOC103830476 | Entrez gene ID : 103830476    
Species bra ath gma vvi ppo mtr sly hvu zma bna cit ghi osa sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0034982 [list] [network] mitochondrial protein processing  (10 genes)  IEA  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (12 genes)  IEA  
GO:0065003 [list] [network] protein-containing complex assembly  (566 genes)  IEA  
GO CC
GO:0005745 [list] [network] m-AAA complex  (4 genes)  IEA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (141 genes)  IEA  
GO MF
GO:0004176 [list] [network] ATP-dependent peptidase activity  (46 genes)  IEA  
GO:0004222 [list] [network] metalloendopeptidase activity  (72 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (641 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2916 genes)  IEA  
Protein XP_009104519.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_009104519.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_009104519.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103830476
ath-u.5
for
FTSH12
gma-u.5
for
100819005
vvi-u.5
for
100244978
ppo-u.5
for
18102652
mtr-u.5
for
11407282
sly-u.5
for
101256833


Ortholog ID: 13489
Species bra bna bna ath ghi ghi cit gma vvi ppo mtr sly sot nta nta
Symbol LOC103830476 LOC106405638 LOC106353400 FTSH12 LOC107919911 LOC107895151 LOC102626777 LOC100819005 LOC100244978 LOC18102652 LOC11407282 LOC101256833 LOC102589653 LOC107797813 LOC107807608
Function* ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic-like FTSH protease 12 ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic ATP-dependent zinc metalloprotease FTSH 12, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00260 Glycine, serine and threonine metabolism 2
nta00261 Monobactam biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103830476 106405638 106353400 844294 107919911 107895151 102626777 100819005 100244978 18102652 11407282 101256833 102589653 107797813 107807608
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