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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103836700   putative E3 ubiquitin-protein ligase RF298 
 bra-r.6   103844512   putative E3 ubiquitin-protein ligase RF4 
 bna-r.1   106392277   putative E3 ubiquitin-protein ligase RF298 
 bna-r.1   106401422   putative E3 ubiquitin-protein ligase RF4 
 bna-r.1   106389983   putative E3 ubiquitin-protein ligase RF298 
 ath-u.5   AT4G03000   RING/U-box superfamily protein 
 ath-u.5   AT1G03365   RING/U-box superfamily protein 
 ghi-r.1   107926489   putative E3 ubiquitin-protein ligase RF298 
 ghi-r.1   107929111   putative E3 ubiquitin-protein ligase RF298 
 ghi-r.1   107930293   putative E3 ubiquitin-protein ligase RF298 
 cit-r.1   102627994   putative E3 ubiquitin-protein ligase RF298 
 cit-r.1   102610693   putative E3 ubiquitin-protein ligase RF298 
 gma-u.5   100777140   putative E3 ubiquitin-protein ligase RF298 
 gma-u.5   100775512   putative E3 ubiquitin-protein ligase RF298 
 gma-u.5   100818439   putative E3 ubiquitin-protein ligase RF298 
 vvi-u.5   100249384   putative E3 ubiquitin-protein ligase RF298 
 ppo-u.5   7475938   putative E3 ubiquitin-protein ligase RF298 
 ppo-u.5   7469098   putative E3 ubiquitin-protein ligase RF298 
 mtr-u.5   11445891   putative E3 ubiquitin-protein ligase RF298 
 mtr-u.5   11427665   putative E3 ubiquitin-protein ligase RF4 
 sot-r.1   102594650   putative E3 ubiquitin-protein ligase RF298 
 sot-r.1   102583662   putative E3 ubiquitin-protein ligase RF298 
 sot-r.1   102605675   putative E3 ubiquitin-protein ligase RF298 
 nta-r.1   107819544   putative E3 ubiquitin-protein ligase RF298 
 nta-r.1   107786506   putative E3 ubiquitin-protein ligase RF298 
 nta-r.1   107803733   putative E3 ubiquitin-protein ligase RF298 
 osa-u.5   4337764   putative E3 ubiquitin-protein ligase RF298 
 zma-u.5   103647645   putative E3 ubiquitin-protein ligase RF298 
 zma-u.5   103633130   putative E3 ubiquitin-protein ligase RF298 
 tae-r.2   123111053   putative E3 ubiquitin-protein ligase RF298 
 tae-r.2   123190749   putative E3 ubiquitin-protein ligase RF298 
 tae-r.2   123180377   putative E3 ubiquitin-protein ligase RF298 
 hvu-r.1   123424372   putative E3 ubiquitin-protein ligase RF298 
 sbi-r.1   8077241   putative E3 ubiquitin-protein ligase RF298 
 bdi-r.1   100835844   putative E3 ubiquitin-protein ligase RF4 

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Top 50 coexpressed genes to 103836700 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103836700 (bra-r.6 coexpression data)

CoexMap"103836700"


braLOC103836700 | Entrez gene ID : 103836700    
Species bra bna ath ghi cit gma vvi ppo mtr sot nta osa zma tae hvu sbi bdi cre sly
Paralog 2 3 2 3 2 3 1 2 2 3 3 1 2 3 1 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_009111241.1 [sequence] [blastp]
XP_009111242.1 [sequence] [blastp]
XP_018510498.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 3,  chlo_mito 3  (predict for XP_009111241.1)
chlo 6,  nucl 3,  chlo_mito 3  (predict for XP_009111242.1)
chlo 5,  nucl 3,  cyto 1,  cysk_nucl 1  (predict for XP_018510498.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for XP_009111241.1)
chlo 6,  other 4  (predict for XP_009111242.1)
chlo 6,  other 4  (predict for XP_018510498.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103836700
bra-r.6
for
103844512
bna-r.1
for
106392277
bna-r.1
for
106401422
bna-r.1
for
106389983
ath-u.5
for
AT4G03000
ath-u.5
for
AT1G03365
ghi-r.1
for
107926489
ghi-r.1
for
107929111
ghi-r.1
for
107930293
cit-r.1
for
102627994
cit-r.1
for
102610693
gma-u.5
for
100777140
gma-u.5
for
100775512
gma-u.5
for
100818439
vvi-u.5
for
100249384
ppo-u.5
for
7475938
ppo-u.5
for
7469098
mtr-u.5
for
11445891
mtr-u.5
for
11427665
sot-r.1
for
102594650
sot-r.1
for
102583662
sot-r.1
for
102605675
nta-r.1
for
107819544
nta-r.1
for
107786506
nta-r.1
for
107803733
osa-u.5
for
4337764
zma-u.5
for
103647645
zma-u.5
for
103633130
tae-r.2
for
123111053
tae-r.2
for
123190749
tae-r.2
for
123180377
hvu-r.1
for
123424372
sbi-r.1
for
8077241
bdi-r.1
for
100835844


Ortholog ID: 3250
Species bra bra bna bna bna ath ath ghi ghi cit cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC103836700 LOC103844512 LOC106392277 LOC106401422 LOC106423082 AT4G03000 AT1G03365 LOC107929111 LOC107936598 LOC102627994 LOC102610693 LOC100818439 LOC100793172 LOC100785921 LOC100249384 LOC7475938 LOC7469098 LOC11445891 LOC11427665 LOC101267057 LOC101268285 LOC102594650 LOC102605675 LOC102579237 LOC107819544 LOC107786506 LOC107822368 LOC4337764 LOC103647645 LOC103633130 LOC123111053 LOC123190749 LOC123180377 LOC123424372 LOC8077241 LOC100835844
Function* putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF4 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF4 putative E3 ubiquitin-protein ligase RF4 RING/U-box superfamily protein RING/U-box superfamily protein putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF4 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit00020 Citrate cycle (TCA cycle) 2
cit00785 Lipoic acid metabolism 2
cit01200 Carbon metabolism 2
cit01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 4
gma00250 Alanine, aspartate and glutamate metabolism 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
mtr03272 Virion - Hepatitis viruses 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
sot00270 Cysteine and methionine metabolism 2
sot00460 Cyanoamino acid metabolism 2
sot00920 Sulfur metabolism 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00230 Purine metabolism 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta04120 Ubiquitin mediated proteolysis 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103836700 103844512 106392277 106401422 106423082 828112 10723112 107929111 107936598 102627994 102610693 100818439 100793172 100785921 100249384 7475938 7469098 11445891 11427665 101267057 101268285 102594650 102605675 102579237 107819544 107786506 107822368 4337764 103647645 103633130 123111053 123190749 123180377 123424372 8077241 100835844
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