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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103839012   U-box domain-containing protein 45 
 bra-r.6   103829084   U-box domain-containing protein 6 
 bra-r.6   103835421   U-box domain-containing protein 6 
 bra-r.6   103852407   U-box domain-containing protein 7 
 bna-r.1   111199784   U-box domain-containing protein 6 
 bna-r.1   106431625   U-box domain-containing protein 45 
 bna-r.1   106396879   U-box domain-containing protein 7 
 ath-u.5   AT1G15165   RING/FYVE/PHD zinc finger superfamily protein 
 ath-u.5   AT1G24330   ARM repeat superfamily protein 
 ath-u.5   PUB45   plant U-box 45 
 ghi-r.1   107956980   U-box domain-containing protein 6 
 ghi-r.1   107922584   U-box domain-containing protein 6 
 ghi-r.1   107909827   U-box domain-containing protein 6 
 cit-r.1   102620445   U-box domain-containing protein 6-like 
 gma-u.5   100814944   U-box domain-containing protein 6 
 gma-u.5   100804344   U-box domain-containing protein 45 
 gma-u.5   100794099   U-box domain-containing protein 45 
 vvi-u.5   100256374   U-box domain-containing protein 45 
 ppo-u.5   7480918   U-box domain-containing protein 6 
 ppo-u.5   7460024   U-box domain-containing protein 6 
 mtr-u.5   25501726   U-box domain-containing protein 6 
 mtr-u.5   11442685   U-box domain-containing protein 6 
 sly-u.5   101265333   U-box domain-containing protein 45 
 sot-r.1   102578937   U-box domain-containing protein 45 
 nta-r.1   107766868   U-box domain-containing protein 6 
 nta-r.1   107795111   U-box domain-containing protein 6-like 
 zma-u.5   103650877   U-box domain-containing protein 45 
 zma-u.5   100383455   U-box domain-containing protein 7 
 tae-r.2   123071678   U-box domain-containing protein 45 
 tae-r.2   123062831   U-box domain-containing protein 45 
 tae-r.2   123080024   U-box domain-containing protein 45 
 hvu-r.1   123445035   U-box domain-containing protein 45-like 
 sbi-r.1   8078685   U-box domain-containing protein 45 
 bdi-r.1   100845275   U-box domain-containing protein 45 

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Top 50 coexpressed genes to 103839012 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103839012 (bra-r.6 coexpression data)

CoexMap"103839012"


braLOC103839012 | Entrez gene ID : 103839012    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta zma tae hvu sbi bdi osa cre
Paralog 4 3 3 3 1 3 1 2 2 1 1 2 2 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (533 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (7940 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (531 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009113728.1 [sequence] [blastp]
XP_033137137.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_009113728.1)
nucl 3,  cyto 2,  mito 2,  cysk_nucl 2  (predict for XP_033137137.1)
Subcellular
localization
TargetP
other 9  (predict for XP_009113728.1)
scret 8  (predict for XP_033137137.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103839012
bra-r.6
for
103829084
bra-r.6
for
103835421
bra-r.6
for
103852407
bna-r.1
for
111199784
bna-r.1
for
106431625
bna-r.1
for
106396879
ath-u.5
for
AT1G15165
ath-u.5
for
AT1G24330
ath-u.5
for
PUB45
ghi-r.1
for
107956980
ghi-r.1
for
107922584
ghi-r.1
for
107909827
cit-r.1
for
102620445
gma-u.5
for
100814944
gma-u.5
for
100804344
gma-u.5
for
100794099
vvi-u.5
for
100256374
ppo-u.5
for
7480918
ppo-u.5
for
7460024
mtr-u.5
for
25501726
mtr-u.5
for
11442685
sly-u.5
for
101265333
sot-r.1
for
102578937
nta-r.1
for
107766868
nta-r.1
for
107795111
zma-u.5
for
103650877
zma-u.5
for
100383455
tae-r.2
for
123071678
tae-r.2
for
123062831
tae-r.2
for
123080024
hvu-r.1
for
123445035
sbi-r.1
for
8078685
bdi-r.1
for
100845275


Ortholog ID: 3996
Species bra bra bra bna bna bna ath ath ath ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta zma zma tae tae tae hvu sbi bdi
Symbol LOC103839012 LOC103829084 LOC103835421 LOC111199784 LOC106392083 LOC106425390 AT1G24330 PUB45 AT1G67530 LOC107922584 LOC107909827 LOC121214731 LOC102620445 LOC100814944 LOC100794099 LOC100783271 LOC100256374 LOC7480918 LOC7460024 LOC25501726 LOC11442685 LOC101265333 LOC102578937 LOC107766868 LOC107795111 LOC103650877 LOC100383455 LOC123071678 LOC123062831 LOC123080024 LOC123445035 LOC8078685 LOC100845275
Function* U-box domain-containing protein 45 U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 7 U-box domain-containing protein 6-like ARM repeat superfamily protein plant U-box 45 ARM repeat superfamily protein U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 6-like U-box domain-containing protein 6 U-box domain-containing protein 45 U-box domain-containing protein 7 U-box domain-containing protein 45 U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 45 U-box domain-containing protein 45 U-box domain-containing protein 6 U-box domain-containing protein 6-like U-box domain-containing protein 45 U-box domain-containing protein 7 U-box domain-containing protein 45 U-box domain-containing protein 45 U-box domain-containing protein 45 U-box domain-containing protein 45-like U-box domain-containing protein 45 U-box domain-containing protein 45
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
bra00564 Glycerophospholipid metabolism 2
bra04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 4
bna01240 Biosynthesis of cofactors 4
bna00906 Carotenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00562 Inositol phosphate metabolism 2
vvi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00440 Phosphonate and phosphinate metabolism 4
nta00564 Glycerophospholipid metabolism 4
nta00565 Ether lipid metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 3
hvu04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103839012 103829084 103835421 111199784 106392083 106425390 839049 839684 843074 107922584 107909827 121214731 102620445 100814944 100794099 100783271 100256374 7480918 7460024 25501726 11442685 101265333 102578937 107766868 107795111 103650877 100383455 123071678 123062831 123080024 123445035 8078685 100845275
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