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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103852407   U-box domain-containing protein 7 
 ath-u.5   AT1G15165   RING/FYVE/PHD zinc finger superfamily protein 
 ath-u.5   AT1G24330   ARM repeat superfamily protein 
 ath-u.5   PUB45   plant U-box 45 
 gma-u.5   100814944   U-box domain-containing protein 6 
 gma-u.5   100804344   U-box domain-containing protein 45 
 gma-u.5   100794099   U-box domain-containing protein 45 
 vvi-u.5   100256374   U-box domain-containing protein 45 
 ppo-u.5   7480918   U-box domain-containing protein 6 
 ppo-u.5   7460024   U-box domain-containing protein 6 
 mtr-u.5   25501726   U-box domain-containing protein 6 
 mtr-u.5   11442685   U-box domain-containing protein 6 
 sly-u.5   101265333   U-box domain-containing protein 45 
 zma-u.5   103650877   U-box domain-containing protein 45 
 zma-u.5   100383455   U-box domain-containing protein 7 

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Top 50 coexpressed genes to 103852407 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103852407 (bra-r.6 coexpression data)

CoexMap"103852407"


braLOC103852407 | Entrez gene ID : 103852407    
Species bra ath gma vvi ppo mtr sly zma bdi hvu cit bna sbi ghi osa sot nta cre tae
Paralog 1 3 3 1 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (533 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4801 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (7940 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (531 genes)  IEA  
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009127558.1 [sequence] [blastp]
XP_009127559.1 [sequence] [blastp]
XP_033139449.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  plas 1,  cysk 1,  golg 1,  golg_plas 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_009127558.1)
nucl 6,  cyto 1,  chlo 1,  plas 1,  cysk 1,  golg 1,  golg_plas 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_009127559.1)
nucl 6,  cyto 1,  chlo 1,  plas 1,  cysk 1,  golg 1,  golg_plas 1,  cyto_pero 1,  cysk_plas 1,  cyto_E.R. 1  (predict for XP_033139449.1)
Subcellular
localization
TargetP
other 8  (predict for XP_009127558.1)
other 8  (predict for XP_009127559.1)
other 8  (predict for XP_033139449.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103852407
ath-u.5
for
AT1G15165
ath-u.5
for
AT1G24330
ath-u.5
for
PUB45
gma-u.5
for
100814944
gma-u.5
for
100804344
gma-u.5
for
100794099
vvi-u.5
for
100256374
ppo-u.5
for
7480918
ppo-u.5
for
7460024
mtr-u.5
for
25501726
mtr-u.5
for
11442685
sly-u.5
for
101265333
zma-u.5
for
103650877
zma-u.5
for
100383455


Ortholog ID: 3996
Species bra bra bna bna ath ath ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sot nta nta zma zma tae tae hvu sbi bdi
Symbol LOC103835421 LOC103839012 LOC106392083 LOC111199784 PUB45 AT1G67530 LOC121214731 LOC107922584 LOC102620445 LOC100814944 LOC100783271 LOC100256374 LOC7480918 LOC7460024 LOC25501726 LOC11442685 LOC101265333 LOC102578937 LOC107766868 LOC107795111 LOC103650877 LOC100383455 LOC123062831 LOC123080024 LOC123445035 LOC8078685 LOC100845275
Function* U-box domain-containing protein 6 U-box domain-containing protein 45 U-box domain-containing protein 7 U-box domain-containing protein 6 plant U-box 45 ARM repeat superfamily protein U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 6-like U-box domain-containing protein 6 U-box domain-containing protein 7 U-box domain-containing protein 45 U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 45 U-box domain-containing protein 45 U-box domain-containing protein 6 U-box domain-containing protein 6-like U-box domain-containing protein 45 U-box domain-containing protein 7 U-box domain-containing protein 45 U-box domain-containing protein 45 U-box domain-containing protein 45-like U-box domain-containing protein 45 U-box domain-containing protein 45
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
bra00564 Glycerophospholipid metabolism 2
bra04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 4
bna01240 Biosynthesis of cofactors 4
bna00906 Carotenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00562 Inositol phosphate metabolism 2
vvi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00440 Phosphonate and phosphinate metabolism 4
nta00564 Glycerophospholipid metabolism 4
nta00565 Ether lipid metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 3
hvu04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103835421 103839012 106392083 111199784 839684 843074 121214731 107922584 102620445 100814944 100783271 100256374 7480918 7460024 25501726 11442685 101265333 102578937 107766868 107795111 103650877 100383455 123062831 123080024 123445035 8078685 100845275
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