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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8078685   U-box domain-containing protein 45 
 zma-u.5   100383455   U-box domain-containing protein 7 
 zma-u.5   103650877   U-box domain-containing protein 45 
 ath-u.5   AT1G15165   RING/FYVE/PHD zinc finger superfamily protein 
 ath-u.5   AT1G24330   ARM repeat superfamily protein 
 ath-u.5   PUB45   plant U-box 45 
 gma-u.5   100814944   U-box domain-containing protein 6 
 gma-u.5   100804344   U-box domain-containing protein 45 
 gma-u.5   100794099   U-box domain-containing protein 45 
 sly-u.5   101265333   U-box domain-containing protein 45 
 vvi-u.5   100256374   U-box domain-containing protein 45 
 ppo-u.5   7480918   U-box domain-containing protein 6 
 ppo-u.5   7460024   U-box domain-containing protein 6 
 mtr-u.5   11442685   U-box domain-containing protein 6 
 mtr-u.5   25501726   U-box domain-containing protein 6 

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Top 50 coexpressed genes to 8078685 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8078685 (sbi-r.1 coexpression data)

CoexMap"8078685"


sbiLOC8078685 | Entrez gene ID : 8078685    
Species sbi zma ath gma sly vvi ppo mtr bra nta osa cre cit hvu bdi sot tae bna ghi
Paralog 1 2 3 3 1 1 2 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (412 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (4816 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (328 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002458929.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002458929.2)
Subcellular
localization
TargetP
other 7  (predict for XP_002458929.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8078685

.
zma-u.5
for
100383455

.
zma-u.5
for
103650877

.
ath-u.5
for
AT1G15165

.
ath-u.5
for
AT1G24330

.
ath-u.5
for
PUB45

.
gma-u.5
for
100814944

.
gma-u.5
for
100804344

.
gma-u.5
for
100794099

.
sly-u.5
for
101265333

.
vvi-u.5
for
100256374

.
ppo-u.5
for
7480918

.
ppo-u.5
for
7460024

.
mtr-u.5
for
11442685

.
mtr-u.5
for
25501726

.


Ortholog ID: 3996
Species ath ath gma gma sly zma zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol PUB45 AT1G67530 LOC100814944 LOC100783271 LOC101265333 LOC103650877 LOC100383455 LOC103835421 LOC103839012 LOC100256374 LOC7480918 LOC7460024 LOC25501726 LOC11442685 LOC123062831 LOC123080024 LOC123445035 LOC121214731 LOC107922584 LOC106392083 LOC111199784 LOC8078685 LOC102578937 LOC102620445 LOC100845275 LOC107766868 LOC107795111
Function* plant U-box 45 ARM repeat superfamily protein U-box domain-containing protein 6 U-box domain-containing protein 7 U-box domain-containing protein 45 U-box domain-containing protein 45 U-box domain-containing protein 7 U-box domain-containing protein 6 U-box domain-containing protein 45 U-box domain-containing protein 45 U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 45 U-box domain-containing protein 45 U-box domain-containing protein 45-like U-box domain-containing protein 6 U-box domain-containing protein 6 U-box domain-containing protein 7 U-box domain-containing protein 6 U-box domain-containing protein 45 U-box domain-containing protein 45 U-box domain-containing protein 6-like U-box domain-containing protein 45 U-box domain-containing protein 6 U-box domain-containing protein 6-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
zma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
bra00564 Glycerophospholipid metabolism 2
bra04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00562 Inositol phosphate metabolism 2
vvi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
mtr04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 3
hvu04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00230 Purine metabolism 3
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 4
bna01240 Biosynthesis of cofactors 4
bna00906 Carotenoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00440 Phosphonate and phosphinate metabolism 4
nta00564 Glycerophospholipid metabolism 4
nta00565 Ether lipid metabolism 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839684 843074 100814944 100783271 101265333 103650877 100383455 103835421 103839012 100256374 7480918 7460024 25501726 11442685 123062831 123080024 123445035 121214731 107922584 106392083 111199784 8078685 102578937 102620445 100845275 107766868 107795111
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