Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103845267   E3 ubiquitin-protein ligase listerin 
 bra-r.6   103856694   E3 ubiquitin-protein ligase listerin-like 
 bna-r.1   106420472   E3 ubiquitin-protein ligase listerin 
 bna-r.1   106376282   E3 ubiquitin-protein ligase listerin 
 bna-r.1   106387157   E3 ubiquitin-protein ligase listerin-like 
 ath-u.5   AT5G58410   HEAT/U-box domain-containing protein 
 ghi-r.1   107935073   E3 ubiquitin-protein ligase listerin 
 ghi-r.1   107927076   E3 ubiquitin-protein ligase listerin 
 cit-r.1   102622803   E3 ubiquitin-protein ligase listerin 
 gma-u.5   100775576   E3 ubiquitin-protein ligase listerin 
 vvi-u.5   100267314   E3 ubiquitin-protein ligase listerin 
 ppo-u.5   7458833   E3 ubiquitin-protein ligase listerin 
 mtr-u.5   11406006   E3 ubiquitin-protein ligase listerin 
 sly-u.5   101247956   E3 ubiquitin-protein ligase listerin 
 sot-r.1   102580043   E3 ubiquitin-protein ligase listerin 
 nta-r.1   107796960   E3 ubiquitin-protein ligase listerin-like 
 nta-r.1   107820607   E3 ubiquitin-protein ligase listerin 
 osa-u.5   4327816   E3 ubiquitin-protein ligase listerin 
 zma-u.5   103647118   E3 ubiquitin-protein ligase listerin 
 tae-r.2   123123953   E3 ubiquitin-protein ligase listerin 
 tae-r.2   123114417   E3 ubiquitin-protein ligase listerin 
 tae-r.2   123087509   E3 ubiquitin-protein ligase listerin 
 hvu-r.1   123395190   E3 ubiquitin-protein ligase listerin 
 sbi-r.1   8085627   E3 ubiquitin-protein ligase listerin 
 bdi-r.1   100821292   E3 ubiquitin-protein ligase listerin 
 cre-r.1   CHLRE_06g252100v5   uncharacterized protein 

close


Top 50 coexpressed genes to 103845267 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 103845267 (bra-r.6 coexpression data)

CoexMap"103845267"


braLOC103845267 | Entrez gene ID : 103845267    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1990116 [list] [network] ribosome-associated ubiquitin-dependent protein catabolic process  (3 genes)  IEA  
GO:0072344 [list] [network] rescue of stalled ribosome  (13 genes)  IEA  
GO CC
GO:1990112 [list] [network] RQC complex  (4 genes)  IEA  
GO:0005829 [list] [network] cytosol  (1543 genes)  IEA  
GO MF
GO:0043023 [list] [network] ribosomal large subunit binding  (14 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (295 genes)  IEA  
Protein XP_009120349.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  plas 1,  cysk 1,  cysk_nucl 1,  nucl_plas 1,  cysk_plas 1  (predict for XP_009120349.1)
Subcellular
localization
TargetP
mito 5,  chlo 5  (predict for XP_009120349.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103845267
bra-r.6
for
103856694
bna-r.1
for
106420472
bna-r.1
for
106376282
bna-r.1
for
106387157
ath-u.5
for
AT5G58410
ghi-r.1
for
107935073
ghi-r.1
for
107927076
cit-r.1
for
102622803
gma-u.5
for
100775576
vvi-u.5
for
100267314
ppo-u.5
for
7458833
mtr-u.5
for
11406006
sly-u.5
for
101247956
sot-r.1
for
102580043
nta-r.1
for
107796960
nta-r.1
for
107820607
osa-u.5
for
4327816
zma-u.5
for
103647118
tae-r.2
for
123123953
tae-r.2
for
123114417
tae-r.2
for
123087509
hvu-r.1
for
123395190
sbi-r.1
for
8085627
bdi-r.1
for
100821292
cre-r.1
for
CHLRE_06g252100v5


Ortholog ID: 9176
Species bra bra bna bna bna ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC103845267 LOC103856694 LOC106376282 LOC106387157 LOC106435791 AT5G58410 LOC107935073 LOC107927076 LOC102622803 LOC100775576 LOC100267314 LOC7458833 LOC11406006 LOC101247956 LOC102580043 LOC107796960 LOC107820607 LOC4327816 LOC103647118 LOC123123953 LOC123114417 LOC123087509 LOC123395190 LOC8085627 LOC100821292 CHLRE_06g252100v5
Function* E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin-like E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin-like E3 ubiquitin-protein ligase listerin HEAT/U-box domain-containing protein E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin-like E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin E3 ubiquitin-protein ligase listerin uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03015 mRNA surveillance pathway 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 5
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103845267 103856694 106376282 106387157 106435791 835954 107935073 107927076 102622803 100775576 100267314 7458833 11406006 101247956 102580043 107796960 107820607 4327816 103647118 123123953 123114417 123087509 123395190 8085627 100821292 5722179
The preparation time of this page was 1.0 [sec].