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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106445617   pentatricopeptide repeat-containing protein At2g15980 
 bna-r.1   106396114   pentatricopeptide repeat-containing protein At2g15980-like 
 ath-u.5   AT2G15980   Tetratricopeptide repeat (TPR)-like superfamily protein 
 ghi-r.1   107922204   pentatricopeptide repeat-containing protein At2g15980 
 cit-r.1   102616021   pentatricopeptide repeat-containing protein At2g15980 
 gma-u.5   100809831   pentatricopeptide repeat-containing protein At2g15980 
 vvi-u.5   100267626   pentatricopeptide repeat-containing protein At2g15980 
 ppo-u.5   7480609   pentatricopeptide repeat-containing protein At2g15980 
 mtr-u.5   25492693   pentatricopeptide repeat-containing protein At2g15980 
 mtr-u.5   112416098   pentatricopeptide repeat-containing protein At2g15980 
 sly-u.5   101266680   pentatricopeptide repeat-containing protein At2g15980 
 sot-r.1   102595226   pentatricopeptide repeat-containing protein At2g15980 
 nta-r.1   107798932   pentatricopeptide repeat-containing protein At2g15980-like 
 nta-r.1   107771359   pentatricopeptide repeat-containing protein At2g15980-like 
 osa-u.5   9267586   pentatricopeptide repeat-containing protein At2g15980 
 zma-u.5   118471908   pentatricopeptide repeat-containing protein At2g15980-like 
 zma-u.5   103633197   uncharacterized LOC103633197 
 tae-r.2   123190344   pentatricopeptide repeat-containing protein At2g15980 
 tae-r.2   123054491   pentatricopeptide repeat-containing protein At2g15980 
 tae-r.2   123046619   pentatricopeptide repeat-containing protein At2g15980 
 hvu-r.1   123427892   pentatricopeptide repeat-containing protein At2g15980 
 sbi-r.1   8080713   pentatricopeptide repeat-containing protein At2g15980 
 bdi-r.1   100822357   pentatricopeptide repeat-containing protein At2g15980 

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Top 50 coexpressed genes to 106445617 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106445617 (bna-r.1 coexpression data)

CoexMap"103846071"


braLOC103846071 | Entrez gene ID : 103846071    
Species bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi bra cre
Paralog 2 1 1 1 1 1 1 2 1 1 2 1 2 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (6277 genes)  IEA  
Protein XP_009121238.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo_mito 4,  chlo 3,  cyto_mito 2,  nucl 1  (predict for XP_009121238.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_009121238.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106445617
bna-r.1
for
106396114
ath-u.5
for
AT2G15980
ghi-r.1
for
107922204
cit-r.1
for
102616021
gma-u.5
for
100809831
vvi-u.5
for
100267626
ppo-u.5
for
7480609
mtr-u.5
for
25492693
mtr-u.5
for
112416098
sly-u.5
for
101266680
sot-r.1
for
102595226
nta-r.1
for
107798932
nta-r.1
for
107771359
osa-u.5
for
9267586
zma-u.5
for
118471908
zma-u.5
for
103633197
tae-r.2
for
123190344
tae-r.2
for
123054491
tae-r.2
for
123046619
hvu-r.1
for
123427892
sbi-r.1
for
8080713
bdi-r.1
for
100822357


Ortholog ID: 10653
Species bna bna ath ghi cit gma vvi ppo mtr mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC106445617 LOC106396114 AT2G15980 LOC107922204 LOC102616021 LOC100809831 LOC100267626 LOC7480609 LOC25492693 LOC112416098 LOC101266680 LOC102595226 LOC107798932 LOC107771359 LOC9267586 LOC118471908 LOC103633197 LOC123190344 LOC123054491 LOC123046619 LOC123427892 LOC8080713 LOC100822357
Function* pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980-like Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980-like pentatricopeptide repeat-containing protein At2g15980-like pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980-like uncharacterized LOC103633197 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00640 Propanoate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03015 mRNA surveillance pathway 6
tae03040 Spliceosome 6
tae00220 Arginine biosynthesis 4
tae00240 Pyrimidine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106445617 106396114 816093 107922204 102616021 100809831 100267626 7480609 25492693 112416098 101266680 102595226 107798932 107771359 9267586 118471908 103633197 123190344 123054491 123046619 123427892 8080713 100822357
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