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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107922204   pentatricopeptide repeat-containing protein At2g15980 
 ath-u.5   AT2G15980   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100809831   pentatricopeptide repeat-containing protein At2g15980 
 vvi-u.5   100267626   pentatricopeptide repeat-containing protein At2g15980 
 ppo-u.5   7480609   pentatricopeptide repeat-containing protein At2g15980 
 mtr-u.5   25492693   pentatricopeptide repeat-containing protein At2g15980 
 mtr-u.5   112416098   pentatricopeptide repeat-containing protein At2g15980 
 sly-u.5   101266680   pentatricopeptide repeat-containing protein At2g15980 
 osa-u.5   9267586   pentatricopeptide repeat-containing protein At2g15980 
 zma-u.5   118471908   pentatricopeptide repeat-containing protein At2g15980-like 
 zma-u.5   103633197   uncharacterized LOC103633197 

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Top 50 coexpressed genes to 107922204 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107922204 (ghi-r.1 coexpression data)

CoexMap"107922204"


ghiLOC107922204 | Entrez gene ID : 107922204    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 1 1 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (21 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (25 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1647 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016707587.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  mito 2,  cyto_mito 1  (predict for XP_016707587.2)
Subcellular
localization
TargetP
other 6  (predict for XP_016707587.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107922204
ath-u.5
for
AT2G15980
gma-u.5
for
100809831
vvi-u.5
for
100267626
ppo-u.5
for
7480609
mtr-u.5
for
25492693
mtr-u.5
for
112416098
sly-u.5
for
101266680
osa-u.5
for
9267586
zma-u.5
for
118471908
zma-u.5
for
103633197


Ortholog ID: 10653
Species ghi ath bna bna cit gma vvi ppo mtr mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC107922204 AT2G15980 LOC106445617 LOC106396114 LOC102616021 LOC100809831 LOC100267626 LOC7480609 LOC112416098 LOC25492693 LOC101266680 LOC102595226 LOC107798932 LOC107771359 LOC9267586 LOC103633197 LOC118471908 LOC123190344 LOC123054491 LOC123427892 LOC8080713 LOC100822357
Function* pentatricopeptide repeat-containing protein At2g15980 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980-like pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980-like pentatricopeptide repeat-containing protein At2g15980-like pentatricopeptide repeat-containing protein At2g15980 uncharacterized LOC103633197 pentatricopeptide repeat-containing protein At2g15980-like pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00640 Propanoate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107922204 816093 106445617 106396114 102616021 100809831 100267626 7480609 112416098 25492693 101266680 102595226 107798932 107771359 9267586 103633197 118471908 123190344 123054491 123427892 8080713 100822357
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