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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7480609   pentatricopeptide repeat-containing protein At2g15980 
 ppo-r.4   7480609   pentatricopeptide repeat-containing protein At2g15980 
 ppo-m.4   7480609   pentatricopeptide repeat-containing protein At2g15980 
 gma-u.5   100809831   pentatricopeptide repeat-containing protein At2g15980 
 mtr-u.5   112416098   pentatricopeptide repeat-containing protein At2g15980 
 mtr-u.5   25492693   pentatricopeptide repeat-containing protein At2g15980 
 ath-u.5   AT2G15980   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100267626   pentatricopeptide repeat-containing protein At2g15980 
 sly-u.5   101266680   pentatricopeptide repeat-containing protein At2g15980 
 osa-u.5   9267586   pentatricopeptide repeat-containing protein At2g15980 
 zma-u.5   118471908   pentatricopeptide repeat-containing protein At2g15980-like 
 zma-u.5   103633197   uncharacterized LOC103633197 

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Top 50 coexpressed genes to 7480609 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7480609 (ppo-u.5 coexpression data)

CoexMap"7480609"


ppoLOC7480609 | Entrez gene ID : 7480609    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024455704.2 [sequence] [blastp]
XP_024455705.2 [sequence] [blastp]
XP_024455707.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  pero 2,  mito 1  (predict for XP_024455704.2)
chlo 6,  pero 2,  mito 1  (predict for XP_024455705.2)
chlo 6,  pero 2,  mito 1  (predict for XP_024455707.2)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_024455704.2)
chlo 5,  other 3  (predict for XP_024455705.2)
chlo 5,  other 3  (predict for XP_024455707.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7480609

.
ppo-r.4
for
7480609

.
ppo-m.4
for
7480609

.
gma-u.5
for
100809831

.
mtr-u.5
for
112416098

.
mtr-u.5
for
25492693

.
ath-u.5
for
AT2G15980

.
vvi-u.5
for
100267626

.
sly-u.5
for
101266680

.
osa-u.5
for
9267586

.
zma-u.5
for
118471908

.
zma-u.5
for
103633197

.


Ortholog ID: 10653
Species ath gma sly osa zma zma vvi ppo mtr mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol AT2G15980 LOC100809831 LOC101266680 LOC9267586 LOC103633197 LOC118471908 LOC100267626 LOC7480609 LOC112416098 LOC25492693 LOC123190344 LOC123054491 LOC123427892 LOC107922204 LOC106445617 LOC106396114 LOC8080713 LOC102595226 LOC102616021 LOC100822357 LOC107798932 LOC107771359
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 uncharacterized LOC103633197 pentatricopeptide repeat-containing protein At2g15980-like pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980-like pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980-like pentatricopeptide repeat-containing protein At2g15980-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00640 Propanoate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816093 100809831 101266680 9267586 103633197 118471908 100267626 7480609 112416098 25492693 123190344 123054491 123427892 107922204 106445617 106396114 8080713 102595226 102616021 100822357 107798932 107771359
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