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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123054491   pentatricopeptide repeat-containing protein At2g15980 
 tae-r.2   123190344   pentatricopeptide repeat-containing protein At2g15980 
 tae-r.2   123046619   pentatricopeptide repeat-containing protein At2g15980 
 hvu-r.1   123427892   pentatricopeptide repeat-containing protein At2g15980 
 bdi-r.1   100822357   pentatricopeptide repeat-containing protein At2g15980 
 osa-u.5   9267586   pentatricopeptide repeat-containing protein At2g15980 
 zma-u.5   118471908   pentatricopeptide repeat-containing protein At2g15980-like 
 zma-u.5   103633197   uncharacterized LOC103633197 
 sbi-r.1   8080713   pentatricopeptide repeat-containing protein At2g15980 
 ath-u.5   AT2G15980   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100809831   pentatricopeptide repeat-containing protein At2g15980 
 sly-u.5   101266680   pentatricopeptide repeat-containing protein At2g15980 
 vvi-u.5   100267626   pentatricopeptide repeat-containing protein At2g15980 
 ppo-u.5   7480609   pentatricopeptide repeat-containing protein At2g15980 
 mtr-u.5   25492693   pentatricopeptide repeat-containing protein At2g15980 
 mtr-u.5   112416098   pentatricopeptide repeat-containing protein At2g15980 
 ghi-r.1   107922204   pentatricopeptide repeat-containing protein At2g15980 
 bna-r.1   106396114   pentatricopeptide repeat-containing protein At2g15980-like 
 bna-r.1   106445617   pentatricopeptide repeat-containing protein At2g15980 
 sot-r.1   102595226   pentatricopeptide repeat-containing protein At2g15980 
 cit-r.1   102616021   pentatricopeptide repeat-containing protein At2g15980 
 nta-r.1   107771359   pentatricopeptide repeat-containing protein At2g15980-like 
 nta-r.1   107798932   pentatricopeptide repeat-containing protein At2g15980-like 

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Top 50 coexpressed genes to 123054491 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123054491 (tae-r.2 coexpression data)

CoexMap"123054491"


taeLOC123054491 | Entrez gene ID : 123054491    
Species tae hvu bdi osa zma sbi ath gma sly vvi ppo mtr ghi bna sot cit nta bra cre
Paralog 3 1 1 1 2 1 1 1 1 1 1 2 1 2 1 1 2 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044334204.1 [sequence] [blastp]
XP_044334205.1 [sequence] [blastp]
XP_044334206.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 2,  chlo 1,  plas 1,  cysk 1,  E.R._vacu 1,  cysk_plas 1  (predict for XP_044334204.1)
cyto 5,  nucl 2,  chlo 1,  plas 1,  cysk 1,  E.R._vacu 1,  cysk_plas 1  (predict for XP_044334205.1)
cyto 5,  nucl 2,  chlo 1,  plas 1,  cysk 1,  E.R._vacu 1,  cysk_plas 1  (predict for XP_044334206.1)
Subcellular
localization
TargetP
other 9  (predict for XP_044334204.1)
other 9  (predict for XP_044334205.1)
other 9  (predict for XP_044334206.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123054491
tae-r.2
for
123190344
tae-r.2
for
123046619
hvu-r.1
for
123427892
bdi-r.1
for
100822357
osa-u.5
for
9267586
zma-u.5
for
118471908
zma-u.5
for
103633197
sbi-r.1
for
8080713
ath-u.5
for
AT2G15980
gma-u.5
for
100809831
sly-u.5
for
101266680
vvi-u.5
for
100267626
ppo-u.5
for
7480609
mtr-u.5
for
25492693
mtr-u.5
for
112416098
ghi-r.1
for
107922204
bna-r.1
for
106396114
bna-r.1
for
106445617
sot-r.1
for
102595226
cit-r.1
for
102616021
nta-r.1
for
107771359
nta-r.1
for
107798932


Ortholog ID: 10653
Species tae tae tae hvu bdi osa zma zma sbi ath gma sly vvi ppo mtr mtr ghi bna bna sot cit nta nta
Symbol LOC123054491 LOC123190344 LOC123046619 LOC123427892 LOC100822357 LOC9267586 LOC118471908 LOC103633197 LOC8080713 AT2G15980 LOC100809831 LOC101266680 LOC100267626 LOC7480609 LOC25492693 LOC112416098 LOC107922204 LOC106396114 LOC106445617 LOC102595226 LOC102616021 LOC107771359 LOC107798932
Function* pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980-like uncharacterized LOC103633197 pentatricopeptide repeat-containing protein At2g15980 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980-like pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980 pentatricopeptide repeat-containing protein At2g15980-like pentatricopeptide repeat-containing protein At2g15980-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03015 mRNA surveillance pathway 6
tae03040 Spliceosome 6
tae00220 Arginine biosynthesis 4
tae00240 Pyrimidine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma00730 Thiamine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00640 Propanoate metabolism 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123054491 123190344 123046619 123427892 100822357 9267586 118471908 103633197 8080713 816093 100809831 101266680 100267626 7480609 25492693 112416098 107922204 106396114 106445617 102595226 102616021 107771359 107798932
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