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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103855553   uncharacterized LOC103855553 
 bna-r.1   106357027   uncharacterized LOC106357027 
 bna-r.1   106428773   uncharacterized LOC106428773 
 ath-u.5   AT4G17610   tRNA/rRNA methyltransferase (SpoU) family protein 
 ghi-r.1   121203340   uncharacterized LOC121203340 
 ghi-r.1   107946698   uncharacterized LOC107946698 
 ghi-r.1   107939899   uncharacterized LOC107939899 
 cit-r.1   102625348   uncharacterized LOC102625348 
 gma-u.5   100809637   uncharacterized LOC100809637 
 vvi-u.5   100855390   uncharacterized LOC100855390 
 ppo-u.5   18094554   uncharacterized LOC18094554 
 mtr-u.5   25493589   uncharacterized LOC25493589 
 sly-u.5   101255721   uncharacterized LOC101255721 
 sot-r.1   102579800   uncharacterized LOC102579800 
 nta-r.1   107784157   uncharacterized LOC107784157 
 nta-r.1   107767630   uncharacterized LOC107767630 
 osa-u.5   4331280   uncharacterized LOC4331280 
 zma-u.5   100278565   uncharacterized LOC100278565 
 tae-r.2   123099174   uncharacterized LOC123099174 
 tae-r.2   123093975   uncharacterized LOC123093975 
 tae-r.2   123106138   uncharacterized LOC123106138 
 hvu-r.1   123450087   uncharacterized LOC123450087 
 sbi-r.1   8059543   uncharacterized LOC8059543 
 bdi-r.1   100841607   uncharacterized LOC100841607 
 cre-r.1   CHLRE_01g027350v5   uncharacterized protein 

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Top 50 coexpressed genes to 103855553 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103855553 (bra-r.6 coexpression data)

CoexMap"103855553"


braLOC103855553 | Entrez gene ID : 103855553    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 1 2 1 3 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030488 [list] [network] tRNA methylation  (31 genes)  IEA  
GO CC
GO MF
GO:0016423 [list] [network] tRNA (guanine) methyltransferase activity  (5 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1857 genes)  IEA  
Protein XP_009130801.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  chlo_mito 2,  plas 1  (predict for XP_009130801.1)
Subcellular
localization
TargetP
chlo 6,  scret 6  (predict for XP_009130801.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103855553
bna-r.1
for
106357027
bna-r.1
for
106428773
ath-u.5
for
AT4G17610
ghi-r.1
for
121203340
ghi-r.1
for
107946698
ghi-r.1
for
107939899
cit-r.1
for
102625348
gma-u.5
for
100809637
vvi-u.5
for
100855390
ppo-u.5
for
18094554
mtr-u.5
for
25493589
sly-u.5
for
101255721
sot-r.1
for
102579800
nta-r.1
for
107784157
nta-r.1
for
107767630
osa-u.5
for
4331280
zma-u.5
for
100278565
tae-r.2
for
123099174
tae-r.2
for
123093975
tae-r.2
for
123106138
hvu-r.1
for
123450087
sbi-r.1
for
8059543
bdi-r.1
for
100841607
cre-r.1
for
CHLRE_01g027350v5


Ortholog ID: 9586
Species bra bna bna ath ghi ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC103855553 LOC106357027 LOC106428773 AT4G17610 LOC121203340 LOC107946698 LOC107939899 LOC102625348 LOC100809637 LOC100855390 LOC18094554 LOC25493589 LOC101255721 LOC102579800 LOC107784157 LOC107767630 LOC4331280 LOC100278565 LOC123099174 LOC123106138 LOC123093973 LOC123450087 LOC8059543 LOC100841607 CHLRE_01g027350v5
Function* uncharacterized LOC103855553 uncharacterized LOC106357027 uncharacterized LOC106428773 tRNA/rRNA methyltransferase (SpoU) family protein uncharacterized LOC121203340 uncharacterized LOC107946698 uncharacterized LOC107939899 uncharacterized LOC102625348 uncharacterized LOC100809637 uncharacterized LOC100855390 uncharacterized LOC18094554 uncharacterized LOC25493589 uncharacterized LOC101255721 uncharacterized LOC102579800 uncharacterized LOC107784157 uncharacterized LOC107767630 uncharacterized LOC4331280 uncharacterized LOC100278565 uncharacterized LOC123099174 uncharacterized LOC123106138 probable methyltransferase TARBP1 uncharacterized LOC123450087 uncharacterized LOC8059543 uncharacterized LOC100841607 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03008 Ribosome biogenesis in eukaryotes 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03008 Ribosome biogenesis in eukaryotes 3
gma03082 ATP-dependent chromatin remodeling 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 3
vvi03015 mRNA surveillance pathway 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly03008 Ribosome biogenesis in eukaryotes 3
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
osa03020 RNA polymerase 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03420 Nucleotide excision repair 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03082 ATP-dependent chromatin remodeling 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103855553 106357027 106428773 827480 121203340 107946698 107939899 102625348 100809637 100855390 18094554 25493589 101255721 102579800 107784157 107767630 4331280 100278565 123099174 123106138 123093973 123450087 8059543 100841607 5715308
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