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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107784157   uncharacterized LOC107784157 
 sly-u.5   101255721   uncharacterized LOC101255721 
 ath-u.5   AT4G17610   tRNA/rRNA methyltransferase (SpoU) family protein 
 gma-u.5   100809637   uncharacterized LOC100809637 
 vvi-u.5   100855390   uncharacterized LOC100855390 
 ppo-u.5   18094554   uncharacterized LOC18094554 
 mtr-u.5   25493589   uncharacterized LOC25493589 
 osa-u.5   4331280   uncharacterized LOC4331280 
 zma-u.5   100278565   uncharacterized LOC100278565 

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Top 50 coexpressed genes to 107784157 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107784157 (nta-r.1 coexpression data)

CoexMap"107784157"


ntaLOC107784157 | Entrez gene ID : 107784157      
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030488 [list] [network] tRNA methylation  (53 genes)  IEA  
GO CC
GO MF
GO:0016423 [list] [network] tRNA (guanine) methyltransferase activity  (20 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
Protein XP_075102013.1 [sequence] [blastp]
XP_075102014.1 [sequence] [blastp]
XP_075102015.1 [sequence] [blastp]
XP_075102016.1 [sequence] [blastp]
XP_075102017.1 [sequence] [blastp]
XP_075102018.1 [sequence] [blastp]
XP_075102019.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  cyto 1,  extr 1,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_075102013.1)
chlo 3,  nucl 2,  extr 2,  cysk_nucl 1,  cyto 1,  mito 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_075102014.1)
chlo 3,  nucl 2,  cyto 1,  extr 1,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_075102015.1)
chlo 3,  nucl 2,  extr 2,  cysk_nucl 1,  cyto 1,  mito 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_075102016.1)
chlo 3,  nucl 2,  E.R. 2,  cysk_nucl 1,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for XP_075102017.1)
chlo 3,  nucl 2,  E.R. 2,  cysk_nucl 1,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for XP_075102018.1)
chlo 3,  nucl 2,  E.R. 2,  cysk_nucl 1,  mito 1,  plas 1,  vacu 1,  mito_plas 1  (predict for XP_075102019.1)
Subcellular
localization
TargetP
other 4  (predict for XP_075102013.1)
scret 8  (predict for XP_075102014.1)
other 4  (predict for XP_075102015.1)
scret 8  (predict for XP_075102016.1)
other 7,  mito 3  (predict for XP_075102017.1)
other 7,  mito 3  (predict for XP_075102018.1)
other 7,  mito 3  (predict for XP_075102019.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107784157
sly-u.5
for
101255721
ath-u.5
for
AT4G17610
gma-u.5
for
100809637
vvi-u.5
for
100855390
ppo-u.5
for
18094554
mtr-u.5
for
25493589
osa-u.5
for
4331280
zma-u.5
for
100278565


Ortholog ID: 9586
Species nta nta sly sot ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi cre
Symbol LOC107767630 LOC107784157 LOC101255721 LOC102579800 AT4G17610 LOC100809637 LOC103855553 LOC100855390 LOC18094554 LOC25493589 LOC107939899 LOC121203340 LOC106357027 LOC106428773 LOC102625348 LOC4331280 LOC100278565 LOC123099174 LOC123106138 LOC123450087 LOC8059543 LOC100841607 CHLRE_01g027350v5
Function* uncharacterized LOC107767630 uncharacterized LOC107784157 uncharacterized LOC101255721 uncharacterized LOC102579800 tRNA/rRNA methyltransferase (SpoU) family protein uncharacterized LOC100809637 uncharacterized LOC103855553 uncharacterized LOC100855390 uncharacterized LOC18094554 uncharacterized LOC25493589 uncharacterized LOC107939899 uncharacterized LOC121203340 uncharacterized LOC106357027 uncharacterized LOC106428773 uncharacterized LOC102625348 uncharacterized LOC4331280 uncharacterized LOC100278565 uncharacterized LOC123099174 uncharacterized LOC123106138 uncharacterized LOC123450087 uncharacterized LOC8059543 uncharacterized LOC100841607 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
sly03008 Ribosome biogenesis in eukaryotes 3
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 5
ath03008 Ribosome biogenesis in eukaryotes 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma03008 Ribosome biogenesis in eukaryotes 3
gma03082 ATP-dependent chromatin remodeling 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03440 Homologous recombination 3
vvi03015 mRNA surveillance pathway 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03020 RNA polymerase 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 4
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
osa03020 RNA polymerase 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03420 Nucleotide excision repair 2
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 3
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107767630 107784157 101255721 102579800 827480 100809637 103855553 100855390 18094554 25493589 107939899 121203340 106357027 106428773 102625348 4331280 100278565 123099174 123106138 123450087 8059543 100841607 5715308
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