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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103858068   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 ath-u.5   AT2G43370   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100814109   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 gma-u.5   100807978   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 vvi-u.5   100261074   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 ppo-u.5   18106951   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 mtr-u.5   11442373   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 sly-u.5   101256810   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 osa-u.5   4347560   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 
 zma-u.5   100383273   U11/U12 small nuclear ribonucleoprotein 35 kDa protein 

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Top 50 coexpressed genes to 103858068 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103858068 (bra-r.6 coexpression data)

CoexMap"103858068"


braLOC103858068 | Entrez gene ID : 103858068    
Species bra ath gma vvi ppo mtr sly osa zma bdi hvu cit bna sbi ghi sot nta cre tae
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (258 genes)  IEA  
GO CC
GO:0005689 [list] [network] U12-type spliceosomal complex  (30 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (71 genes)  IEA  
GO MF
GO:0017069 [list] [network] snRNA binding  (34 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (432 genes)  IEA  
Protein XP_009133599.1 [sequence] [blastp]
XP_018513363.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_009133599.1)
cyto 6,  pero 1,  mito 1,  plas 1,  golg 1,  golg_plas 1,  mito_plas 1  (predict for XP_018513363.1)
Subcellular
localization
TargetP
other 6  (predict for XP_009133599.1)
other 6  (predict for XP_018513363.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103858068
ath-u.5
for
AT2G43370
gma-u.5
for
100814109
gma-u.5
for
100807978
vvi-u.5
for
100261074
ppo-u.5
for
18106951
mtr-u.5
for
11442373
sly-u.5
for
101256810
osa-u.5
for
4347560
zma-u.5
for
100383273


Ortholog ID: 9436
Species bra bna bna ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC103858068 LOC106388322 LOC106446721 AT2G43370 LOC107933655 LOC107890921 LOC102630036 LOC100814109 LOC100807978 LOC100261074 LOC18106951 LOC11442373 LOC101256810 LOC102599679 LOC107811410 LOC107807733 LOC4347560 LOC100383273 LOC123104384 LOC123112666 LOC123399871 LOC8054808 LOC100823301
Function* U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like RNA-binding (RRM/RBD/RNP motifs) family protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein-like U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein U11/U12 small nuclear ribonucleoprotein 35 kDa protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 4
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa03015 mRNA surveillance pathway 2
osa04144 Endocytosis 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae04016 MAPK signaling pathway - plant 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103858068 106388322 106446721 818938 107933655 107890921 102630036 100814109 100807978 100261074 18106951 11442373 101256810 102599679 107811410 107807733 4347560 100383273 123104384 123112666 123399871 8054808 100823301
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