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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103858892   50S ribosomal protein L13 
 ath-u.5   AT3G01790   Ribosomal protein L13 family protein 
 gma-u.5   100806854   50S ribosomal protein L13 
 gma-u.5   100799712   50S ribosomal protein L13-like 
 gma-u.5   100499790   uncharacterized LOC100499790 
 vvi-u.5   100252470   uncharacterized LOC100252470 
 ppo-u.5   7467704   uncharacterized LOC7467704 
 ppo-u.5   7461305   uncharacterized LOC7461305 
 mtr-u.5   11429059   50S ribosomal protein L13 
 sly-u.5   101267936   uncharacterized LOC101267936 
 osa-u.5   107276303   uncharacterized LOC107276303 
 osa-u.5   4338199   uncharacterized LOC4338199 
 osa-u.5   4338198   uncharacterized LOC4338198 
 zma-u.5   100284119   50S ribosomal protein L13, mitochondrial-like 
 zma-u.5   100273323   uncharacterized LOC100273323 

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Top 50 coexpressed genes to 103858892 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103858892 (bra-r.6 coexpression data)

CoexMap"103858892"


braLOC103858892 | Entrez gene ID : 103858892    
Species bra ath gma vvi ppo mtr sly osa zma hvu bna cit ghi sbi bdi nta tae cre sot
Paralog 1 1 3 1 2 1 1 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG brp03010 [list] [network] Ribosome (2036 genes)
GO BP
GO:0017148 [list] [network] negative regulation of translation  (28 genes)  IEA  
GO:0006412 [list] [network] translation  (893 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (37 genes)  IEA  
GO:0005840 [list] [network] ribosome  (658 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (432 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (649 genes)  IEA  
Protein XP_009134588.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  chlo 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_009134588.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_009134588.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103858892
ath-u.5
for
AT3G01790
gma-u.5
for
100806854
gma-u.5
for
100799712
gma-u.5
for
100499790
vvi-u.5
for
100252470
ppo-u.5
for
7467704
ppo-u.5
for
7461305
mtr-u.5
for
11429059
sly-u.5
for
101267936
osa-u.5
for
107276303
osa-u.5
for
4338199
osa-u.5
for
4338198
zma-u.5
for
100284119
zma-u.5
for
100273323


Ortholog ID: 6560
Species bra bra bna bna ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa osa zma zma tae tae hvu sbi bdi cre
Symbol LOC103849859 LOC103858892 LOC125602321 LOC106393681 AT3G01790 LOC107914081 LOC121229004 LOC102619271 LOC100499790 LOC100806854 LOC100252470 LOC7467704 LOC7461305 LOC11429059 LOC101267936 LOC102583353 LOC107806937 LOC107801585 LOC107276303 LOC4338198 LOC100273323 LOC100284119 LOC123139877 LOC123129001 LOC123403178 LOC8078675 LOC100822076 CHLRE_09g405200v5
Function* 50S ribosomal protein L13 50S ribosomal protein L13 50S ribosomal protein L13-like 50S ribosomal protein L13-like Ribosomal protein L13 family protein 50S ribosomal protein L13 50S ribosomal protein L13 uncharacterized LOC102619271 uncharacterized LOC100499790 50S ribosomal protein L13 uncharacterized LOC100252470 uncharacterized LOC7467704 uncharacterized LOC7461305 50S ribosomal protein L13 uncharacterized LOC101267936 50S ribosomal protein L13 uncharacterized LOC107806937 uncharacterized LOC107801585 uncharacterized LOC107276303 uncharacterized LOC4338198 uncharacterized LOC100273323 50S ribosomal protein L13, mitochondrial-like 50S ribosomal protein L13 uncharacterized LOC123129001 50S ribosomal protein L13 50S ribosomal protein L13 50S ribosomal protein L13 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra00230 Purine metabolism 2
bra00250 Alanine, aspartate and glutamate metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
ath03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi00261 Monobactam biosynthesis 2
ghi00300 Lysine biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi00261 Monobactam biosynthesis 2
ghi00300 Lysine biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 7
nta03010 Ribosome 5
nta03013 Nucleocytoplasmic transport 5
nta03015 mRNA surveillance pathway 5
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
tae00740 Riboflavin metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00010 Glycolysis / Gluconeogenesis 2
tae00620 Pyruvate metabolism 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae00640 Propanoate metabolism 2
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi00240 Pyrimidine metabolism 3
bdi01240 Biosynthesis of cofactors 3
bdi00230 Purine metabolism 3
bdi01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 5
cre01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103849859 103858892 125602321 106393681 821078 107914081 121229004 102619271 100499790 100806854 100252470 7467704 7461305 11429059 101267936 102583353 107806937 107801585 107276303 4338198 100273323 100284119 123139877 123129001 123403178 8078675 100822076 5723202
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